| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0302 |
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| Symbol | |
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| ID | 6484431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 319075 |
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| End bp | 319560 |
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| Gene Length | 486 bp |
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| Protein Length | 161 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642735735 |
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| Product | hemolysin-coregulated protein |
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| Protein accession | YP_002039510 |
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| Protein GI | 194442474 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
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| TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0388692 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 0.0548881 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTTATG ACATTTTTTT GAAAATTGAC GGCATTGATG GCGAGTCAAT GGATGACAAA
CACAAAAATG AAATTGAAGT ACTGAGCTGG CGCTGGAATA TTCATCAGGA ATCCACCATG
CACGCCGGTA GCGGCCTCGG CTCCGGTAAG GTCTCCGTCA CCAACCTGGA TTTTGATCAC
TATATCGACC GCGCCAGCCC GAACCTGTTC AAATACTGCG CCTCCGGCAA GCACATTCCG
CAGGCCATTC TGGTTATGCG TAAGGCTGGC GGCAATCCGC TGGAGTACCT CAAGTATACC
TTCACCGACC TGATTGTCGC CGTGGTTTCC CCGAGCGGCA GCCACGATGG TGAAATCGCC
TCCCGTGAAA CGGTCGAGCT TTCTTTCAGC ACTGTGAAAC AGGAATACGT GGTGCAGAAC
CAGCAGGGCG GCAGCGGCGG CACTATCACC GCAGGCTACG ACTTCAAGGC CAACAAAGAA
ATTTAA
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| Protein sequence | MAYDIFLKID GIDGESMDDK HKNEIEVLSW RWNIHQESTM HAGSGLGSGK VSVTNLDFDH
YIDRASPNLF KYCASGKHIP QAILVMRKAG GNPLEYLKYT FTDLIVAVVS PSGSHDGEIA
SRETVELSFS TVKQEYVVQN QQGGSGGTIT AGYDFKANKE I
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