Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0281 |
Symbol | |
ID | 6482730 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 297873 |
End bp | 298787 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642735714 |
Product | LysR substrate binding domain protein |
Protein accession | YP_002039490 |
Protein GI | 194443748 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 70 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCCA CCTCCGAAGA ACTCGCAATT TTTGTCGCTG TCGTGGAAAG CGGCAGCTTC AGCCGGGCGG CAGAGCAGCT TGGACAGGCC AATTCCGCTG TCAGCCGGGC AGTTAAAAAG CTGGAGATGA AGCTCGGCGT CAGTCTGCTT AATCGTACGA CCCGACAGCT GAGCCTGACT GAAGAAGGAG AGCGATACTT CAGGCGCGTG CAGCAGATAC TGCAAGAAAT GGCCGCCGCA GAAACGGAAA TCATGGAGTC GCGTAATACC CCACGCGGCT TACTGCGTAT CGATGCGGCA ACGCCGGTAA TGCTGCATTT CCTGATGCCG CTGATTAAAC CTTTTCGTGA ACGGTATCCG GAAATAACGT TGTCTCTTGT CTCCTCAGAA ACGTTCATCA ATCTTATTGA ACGAAAAGTG GATGTTGCGA TACGCGCAGG CACGTTGACA GATTCAAGTC TGCGCGCGCG TCCGTTATTT ACCAGTTATC GTAAGATTAT CGCCTCACCG GATTATATTG CCCATTTTGG CAAGCCAGAG GCCGTTGAAG AGTTAAAACG GCATCTGTGC CTGGGGTTCT CAGAACCTGT TTCGCTCAAT ACCTGGCCGA TTGCCTGTAG CGATGGGCAG CTCCATGAGG TTGAATGTGG GATTTCTTCC AACAGCGGGG AAACGTTAAA ACAACTTTGC CTGAACGGTA ACGGCATTGC ATGTCTTTCA GATTATATGA TTGATAAAGA GATCGCGCGG GGAGAACTGG TGGAACTGCT GGCCGATAAA CGTCTGCCGG TAGAAATGCC TTTCAGCGCC GTTTACTACA GCGATCGCGC CGTCAGCACA CGCATTCGGG CATTTATCGA CTTTTTGAGC GAATATATAA GAACAGCTCC CGCAGGAGCT GTGAAAGAGG GGTAA
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Protein sequence | MKATSEELAI FVAVVESGSF SRAAEQLGQA NSAVSRAVKK LEMKLGVSLL NRTTRQLSLT EEGERYFRRV QQILQEMAAA ETEIMESRNT PRGLLRIDAA TPVMLHFLMP LIKPFRERYP EITLSLVSSE TFINLIERKV DVAIRAGTLT DSSLRARPLF TSYRKIIASP DYIAHFGKPE AVEELKRHLC LGFSEPVSLN TWPIACSDGQ LHEVECGISS NSGETLKQLC LNGNGIACLS DYMIDKEIAR GELVELLADK RLPVEMPFSA VYYSDRAVST RIRAFIDFLS EYIRTAPAGA VKEG
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