Gene SNSL254_A0265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0265 
Symbol 
ID6483213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp286468 
End bp287208 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content55% 
IMG OID642735701 
Producthypothetical protein 
Protein accessionYP_002039483 
Protein GI194443910 
COG category[S] Function unknown 
COG ID[COG1720] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00104] probable methyltransferase, YaeB/AF_0241 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.391481 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value0.222677 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTATCGGG TCCGCCCTGA ATATTTCGGC GAAATGAGCA GCTTTCAGTT TGAACAAATC 
GGCGTTATTC GCTCCCCCTA TAAAGAAAAA TTCGCCGTTC CGCGCCAGCC TGGTCTGGTC
AAAAGCGCCT GCGGCGAACT GCATCTGATA GCGCCTTACA ACCAGGCCGA TGCCGTTCGC
GGCCTGGAGG CGTTCAGCCA TTTGTGGGTG CTTTTCGTTT TTCATCAGAC GATGGACGGC
GGCTGGCGGC CAACAGTTCG TCCGCCCCGT CTTGGCGGTA ACGCCAGAAT GGGCGTTTTT
GCCACGCGCT CCACGTTCCG CCCCAATCCG ATTGGCATGT CGCTCGTTGC GCTAAAAGGT
ATCGAGTGCC GGAAAGAGAG CGTAATTCTG AAATTAGGCA GTCTGGATCT GGTGGATGGC
ACGCCGGTGG TGGATATTAA ACCGTATTTA CCGTTTGCCG AGGCCTTACC GGACGCCGCC
GCCAGCTATG CGCAACAGGC GCCGATAGCT GAAATGCCCG TGAGTTTTAC CGCTGAGGTG
GCTCAACAGC TTACGACGCT GGAAAGGCGT TATCCGCAGC TACGGACATT TATTTGCGAT
GTGCTGGCGC AAGATCCTCG CCCGGCTTAT CGTAAGGGTG AAGAGACGGG CAAAACCTAT
GCCGTCTGGC TGCATGATTT TAACGTGCGC TGGCGTGTAG TTAACACCGG ATTTGAAGTG
TTTGCGCTGG AACCACGGTA A
 
Protein sequence
MYRVRPEYFG EMSSFQFEQI GVIRSPYKEK FAVPRQPGLV KSACGELHLI APYNQADAVR 
GLEAFSHLWV LFVFHQTMDG GWRPTVRPPR LGGNARMGVF ATRSTFRPNP IGMSLVALKG
IECRKESVIL KLGSLDLVDG TPVVDIKPYL PFAEALPDAA ASYAQQAPIA EMPVSFTAEV
AQQLTTLERR YPQLRTFICD VLAQDPRPAY RKGEETGKTY AVWLHDFNVR WRVVNTGFEV
FALEPR