Gene SNSL254_A0252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0252 
SymbolrnhB 
ID6483345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand+ 
Start bp271105 
End bp271701 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content56% 
IMG OID642735688 
Productribonuclease HII 
Protein accessionYP_002039470 
Protein GI194442556 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value0.553168 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAT TTGTTTATCC ACACACCCAT TTAGTGGCGG GTGTGGATGA AGTGGGCCGT 
GGCCCGCTGG TGGGCGCCGT AGTGACCGCC GCCGTGATCC TCGATCCGGC GCGTCCGATC 
GTCGGTCTGA ATGATTCCAA AAAATTGTCT GAAAAGCGTC GTCTGTCATT GTATGACGAG 
ATTAAAGAAA AGGCGTTAAG CTGGAGTCTG GGACGCGCGG AAGCGCATGA AATTGATGAG 
CTGAATATTT TGCACGCCAC CATGCTCGCC ATGCAGCGCG CTGTCGCTGG TCTGCATATT 
GCGCCAGAAT ATGTGCTGAT CGACGGCAAT CGCTGTCCGG AGCTGCCTGT GCCGTCAATG 
GCCGTGGTGA AAGGCGACAG CCGCGTGGCG GAGATTAGCG CGGCGTCTAT TCTGGCGAAA 
GTCACCCGCG ACGCAGAAAT GGCGGCGCTG GATATCGTTT TTCCTCAGTA TGGCTTTGCG 
CAGCACAAAG GCTATCCAAC CGCTTTTCAT CTGGAAAAGT TGGCCCAGTA TGGCGCGACG 
GCGCACCACC GACGCAGTTT TGCGCCTGTT AAACGCGCTC TGGGACTTGT GTCCTGA
 
Protein sequence
MIEFVYPHTH LVAGVDEVGR GPLVGAVVTA AVILDPARPI VGLNDSKKLS EKRRLSLYDE 
IKEKALSWSL GRAEAHEIDE LNILHATMLA MQRAVAGLHI APEYVLIDGN RCPELPVPSM 
AVVKGDSRVA EISAASILAK VTRDAEMAAL DIVFPQYGFA QHKGYPTAFH LEKLAQYGAT 
AHHRRSFAPV KRALGLVS