Gene SNSL254_A0247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0247 
Symbolskp 
ID6483710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp267093 
End bp267578 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content47% 
IMG OID642735683 
Productperiplasmic chaperone 
Protein accessionYP_002039465 
Protein GI194444752 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2825] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value0.414945 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAAAGT GGTTATTAGC TGCAGGTCTT GGTTTGGCGA TGGTAACGTC CGCACAGGCT 
GCTGACAAAA TTGCAATCGT CAACATGGGT AATCTGTTCC AACAGGTTGC GCAGAAGACG
GGTGTATCCA ATACACTGGA AAACGAATTT AAAGGCCGTG CGGCTGAACT GCAAAAAATG
GAAACCGATC TGCAATCTAA AATGCAGCGT CTGCAATCCA TGAAAGCAGG TAGCGATCGT
ACTAAGCTGG AAAAAGACGT GATGTCTCAG CGCCAGACTT TCGCACAAAA AGCGCAGGCT
TTTGAGAAAG ATCGCGCTCG TCGTTCCAAC GAAGAACGCA ACAAACTGGT GACTCGTATC
CAGACTGCGG TGAAAAAAGT GGCTAACGAC CAGAGTATCG ATCTGGTGGT AGACGCAAAC
ACCGTTGCTT ACAACAGCAG CGATGTGAAA GACATCACCG CTGACGTACT GAAACAGGTT
AAATAA
 
Protein sequence
MKKWLLAAGL GLAMVTSAQA ADKIAIVNMG NLFQQVAQKT GVSNTLENEF KGRAAELQKM 
ETDLQSKMQR LQSMKAGSDR TKLEKDVMSQ RQTFAQKAQA FEKDRARRSN EERNKLVTRI
QTAVKKVAND QSIDLVVDAN TVAYNSSDVK DITADVLKQV K