Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0243 |
Symbol | uppS |
ID | 6486247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 261514 |
End bp | 262272 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642735679 |
Product | undecaprenyl pyrophosphate synthase |
Protein accession | YP_002039461 |
Protein GI | 194446733 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 0.296524 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGTCTG CAACTCAACC AGTAAGCGAA AATTTGCCAG CACATGGCTG CCGTCATGTT GCCATAATTA TGGATGGCAA TGGTCGCTGG GCGAAAAAGC AAGGGAAGAT CCGGGCCTTT GGGCATAAAG CCGGGGCGAA GTCCGTCCGG CGAGCGGTCT CTTTTGCTGC CAATAACGGT ATTGATGCGT TAACGCTGTA TGCCTTTAGT AGTGAAAACT GGAACCGACC GGCGCAGGAA GTGAGCGCGT TAATGGAGCT GTTTGTGTGG GCGCTGGATA GCGAAGTCAA AAGCCTGCAC CGCCATAACG TTCGCCTGCG TATTATCGGC GATATCAGCC GATTCAACTC ACGTTTACAA GAACGTATTC GCAAATCAGA AGCGCTTACC GCCCATAATA CGGGTCTAAC GCTGAATATC GCTGCGAATT ACGGCGGACG TTGGGATATT GTCCAGGGAG TCCGACAACT GGCGGAACAG GTGCTGGCTG GAGTGCTGCG CCCCGATCAG ATTGATGAAG AGAGACTAGG CCAGCAAATC TGTATGCATG AGCTGGCGCC TGTGGATTTA GTAATTAGGA CTGGGGGAGA GCATCGCATT AGTAACTTTT TGCTTTGGCA AATTGCCTAT GCCGAACTTT ACTTTACGGA TGTTCTTTGG CCCGATTTCG ATGAACAAGA CTTTGAAGGT GCGCTGCATG CCTTTGCTAA TCGAGAGCGT CGTTTCGGCG GTACCGAGCC TGGTGATGAC AAAGCCTGA
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Protein sequence | MLSATQPVSE NLPAHGCRHV AIIMDGNGRW AKKQGKIRAF GHKAGAKSVR RAVSFAANNG IDALTLYAFS SENWNRPAQE VSALMELFVW ALDSEVKSLH RHNVRLRIIG DISRFNSRLQ ERIRKSEALT AHNTGLTLNI AANYGGRWDI VQGVRQLAEQ VLAGVLRPDQ IDEERLGQQI CMHELAPVDL VIRTGGEHRI SNFLLWQIAY AELYFTDVLW PDFDEQDFEG ALHAFANRER RFGGTEPGDD KA
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