| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0230 |
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| Symbol | degP |
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| ID | 6485532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 246642 |
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| End bp | 248078 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642735667 |
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| Product | serine endoprotease |
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| Protein accession | YP_002039449 |
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| Protein GI | 194443684 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAACACA TGAAAAAAAC CACATTAGCA ATGAGTGCAC TGGCTCTGAG TTTAGGTTTG
GCATTGTCGC CTCTGTCTGC CACGGCGGCT GAAACGTCCT CTTCAGCAAT GACTGCCCAG
CAGATGCCAA GCCTGGCACC GATGCTCGAA AAAGTGATGC CATCGGTGGT CAGTATTAAT
GTTGAAGGTA GCACCACGGT GAATACGCCG CGTATGCCGC GTAATTTCCA GCAGTTCTTT
GGCGATGACT CCCCGTTCTG CCAGGACGGT TCTCCGTTCC AGAATTCTCC GTTCTGCCAG
GGCGGCGGTA ACGGCGGCAA CGGCGGTCAA CAACAGAAAT TCATGGCGCT GGGCTCCGGC
GTAATTATTG ACGCCGCGAA GGGCTACGTC GTCACCAACA ACCACGTGGT TGATAACGCC
AGCGTGATTA AAGTACAGCT TAGCGATGGG CGTAAATTCG ATGCTAAAGT GGTGGGCAAA
GATCCGCGTT CTGATATCGC GCTGATTCAA ATTCAGAATC CGAAGAACCT GACGGCGATT
AAGCTGGCGG ACTCCGACGC GCTGCGCGTG GGGGATTATA CCGTCGCTAT TGGTAACCCG
TTTGGTCTGG GCGAAACGGT GACGTCAGGT ATCGTTTCGG CGCTGGGGCG TAGCGGCCTG
AACGTAGAAA ATTACGAGAA CTTTATTCAG ACCGACGCCG CGATTAACCG CGGTAACTCC
GGCGGCGCGC TGGTGAACCT GAACGGTGAG CTGATCGGTA TTAACACCGC GATTCTGGCG
CCGGACGGCG GCAACATCGG TATCGGCTTC GCTATCCCCA GTAACATGGT GAAAAACCTG
ACGTCGCAGA TGGTGGAATA CGGCCAGGTG AAACGCGGCG AACTGGGGAT CATGGGGACT
GAGCTGAATT CCGAATTGGC GAAAGCGATG AAAGTCGACG CCCAGCGAGG CGCGTTCGTC
AGCCAGGTGA TGCCGAATTC GTCCGCGGCG AAAGCGGGTA TCAAAGCCGG GGATGTCATT
ACCTCGCTGA ACGGTAAACC GATCAGCAGC TTTGCGGCGC TGCGCGCTCA GGTCGGCACT
ATGCCGGTCG GCAGCAAAAT CAGCCTCGGT CTGCTGCGTG AAGGTAAAGC GATTACGGTG
AATCTGGAAC TGCAGCAGAG CAGCCAGAGT CAGGTTGATT CCAGCACCAT CTTCAGCGGG
ATTGAAGGCG CTGAAATGAG CAATAAAGGC CAGGATAAAG GCGTTGTGGT GAGCAGCGTG
AAAGCGAACT CACCCGCCGC GCAAATTGGC CTCAAAAAAG GCGATGTGAT TATCGGCGCT
AACCAGCAGC CGGTGAAAAA TATCGCCGAG CTGCGTAAGA TTCTCGACAG CAAGCCGTCG
GTTCTGGCGC TGAATATTCA GCGTGGTGAT AGTTCTATTT ATTTGCTGAT GCAGTAA
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| Protein sequence | MKHMKKTTLA MSALALSLGL ALSPLSATAA ETSSSAMTAQ QMPSLAPMLE KVMPSVVSIN
VEGSTTVNTP RMPRNFQQFF GDDSPFCQDG SPFQNSPFCQ GGGNGGNGGQ QQKFMALGSG
VIIDAAKGYV VTNNHVVDNA SVIKVQLSDG RKFDAKVVGK DPRSDIALIQ IQNPKNLTAI
KLADSDALRV GDYTVAIGNP FGLGETVTSG IVSALGRSGL NVENYENFIQ TDAAINRGNS
GGALVNLNGE LIGINTAILA PDGGNIGIGF AIPSNMVKNL TSQMVEYGQV KRGELGIMGT
ELNSELAKAM KVDAQRGAFV SQVMPNSSAA KAGIKAGDVI TSLNGKPISS FAALRAQVGT
MPVGSKISLG LLREGKAITV NLELQQSSQS QVDSSTIFSG IEGAEMSNKG QDKGVVVSSV
KANSPAAQIG LKKGDVIIGA NQQPVKNIAE LRKILDSKPS VLALNIQRGD SSIYLLMQ
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