Gene SNSL254_A0227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0227 
Symbol 
ID6485936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp243428 
End bp244216 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content56% 
IMG OID642735664 
Productvitamin B12-transporter protein BtuF 
Protein accessionYP_002039446 
Protein GI194446798 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.482155 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value0.717087 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAGGG CGCTGGTCGC CCTGCTGCTT ACGCTCCCGG TGTGGCTTTA CGCTGCGCCG 
CGCGTAATTA CCCTCTCTCC CGCCAATACG GAGCTTGCTT TTGCCGCCGG GATTACGCCC
GTTGGCGTCA GCAGCTATTC CGACTACCCG CCCGAAGCGC AAAAAATAGA ACAGGTCTCT
ACCTGGCAGG GAATGAATCT GGAACGCATT GTGGCGCTGA AGCCGGATCT GGTCGTCGCC
TGGCGCGGCG GTAATGCGGA ACGCCAGGTA AACCAACTGA CGTCATTAGG TATTAAGGTC
ATGTGGGTGG ACGCGGTAAG CATCGAACAG ATCGCCGACA CGCTCCGCCA ACTGGCCGCC
TGGAGCCCGC AGCCGGAAAA GGCTCAGCAG GCAGCGCAGA CATTGCTAAA CGAGTACGCC
GCGCTCAACG CCGAGTATGC CGGTAAAGCT AAAAAGCGCG TCTTTCTTCA GTTTGGCATG
AATCCTCTGT TTACCAGTGG TAAAGGGTCT ATTCAACATC AGGTTTTGAC GACCTGCGGC
GGAGAAAACG TCTTTGCTGA CAGCCGCGTG CCGTGGCCGC AAGTCAGCCG TGAACAGGTG
CTGGCAAGGC ATCCCCAGGC CATTATCGTG GCCGGAAAAG CGGGCGAAAT TCTCAAAATT
GAACAATACT GGGGAAACCT GTTAAAAATT CCGGTTATTC CGCTTAACAG CGACTGGTTT
GAACGCGCAA GCCCGCGTAT TATCCTCGCC GCAAAACAAC TCTGTAATGC GCTTTCACAG
GTGAATTAG
 
Protein sequence
MFRALVALLL TLPVWLYAAP RVITLSPANT ELAFAAGITP VGVSSYSDYP PEAQKIEQVS 
TWQGMNLERI VALKPDLVVA WRGGNAERQV NQLTSLGIKV MWVDAVSIEQ IADTLRQLAA
WSPQPEKAQQ AAQTLLNEYA ALNAEYAGKA KKRVFLQFGM NPLFTSGKGS IQHQVLTTCG
GENVFADSRV PWPQVSREQV LARHPQAIIV AGKAGEILKI EQYWGNLLKI PVIPLNSDWF
ERASPRIILA AKQLCNALSQ VN