Gene SNSL254_A0226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0226 
Symbol 
ID6482917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand- 
Start bp242768 
End bp243391 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content57% 
IMG OID642735663 
Producthypothetical protein 
Protein accessionYP_002039445 
Protein GI194445879 
COG category[S] Function unknown 
COG ID[COG2860] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.0179127 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value0.896873 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGTCT ATTGGCTGGA TATTGTAGGC ACGGCTGTAT TTGCTATCTC TGGCGTGTTG 
CTGGCCGGGA AATTACGTAT GGACCCGTTC GGCGTCCTGG TGCTCGGCGT CGTTACTGCC 
GTCGGCGGCG GGACAATCCG CGATATGGCG CTGGATAACG GCCCGGTATT CTGGGTTAAA 
GATCCTACCG ATCTGGTCGT CGCCATGGTC ACCAGTATGC TGACCATCCT GCTGGTTCGC 
CAGCCAAGAC GTCTGCCGAA ATGGATGTTG CCGGTACTGG ATGCGGTCGG GCTGGCGGTG 
TTTGTCGGCA TTGGGGTGAA TAAAGCCTTC CTCGCTGAAA CGGGGCCATT AGTGGCTGTC 
TGTATGGGCG TGATTACCGG CGTCGGCGGC GGGATTATTC GCGATGTTCT GGCACGCGAG 
ATCCCCATGA TCCTACGCAC CGAAATCTAT GCCACGGCCT GTATTATCGG CGGGATTGTT 
CACGCTACCG CGTTTTATAC GTTTTCAGTA CCGCTGGAAA GCGCCAGCAT GATGGGTATG 
GTGGTCACGC TGTTCATTCG CCTGGCGGCC ATTCGCTGGC ATTTGAAATT GCCGACGTTT 
GCCCTGGATG AAAACGGACG TTGA
 
Protein sequence
MLVYWLDIVG TAVFAISGVL LAGKLRMDPF GVLVLGVVTA VGGGTIRDMA LDNGPVFWVK 
DPTDLVVAMV TSMLTILLVR QPRRLPKWML PVLDAVGLAV FVGIGVNKAF LAETGPLVAV 
CMGVITGVGG GIIRDVLARE IPMILRTEIY ATACIIGGIV HATAFYTFSV PLESASMMGM 
VVTLFIRLAA IRWHLKLPTF ALDENGR