| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0206 |
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| Symbol | hrpB |
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| ID | 6483328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 220460 |
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| End bp | 222934 |
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| Gene Length | 2475 bp |
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| Protein Length | 824 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642735643 |
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| Product | ATP-dependent RNA helicase HrpB |
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| Protein accession | YP_002039425 |
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| Protein GI | 194442804 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.776045 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 74 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTACAAT GCGGCGCAAA GAAAGTTAAC CCCGTGGAGC CGTTTGTGAC GTCATTGCCC
GTTGCCGCCG TATTGCCTGA ATTGTTGACA GCCCTAAAAA CCGCGCCGCA GGTTTTGTTG
TCCGCGCCTA CCGGGGCGGG GAAATCCACC TGGCTGCCGT TGCAACTCCT GCAACAGGGG
CCAGTTGCTG GAAAAATCCT TCTGCTTGAA CCGCGTCGTC TGGCGGCGCG TAATGTCGCG
CAGCGTCTGG CGGAAGCGTT GAATGAAAAG CCTGGCGAAA CGGTAGGTTA CCGGATGCGC
GCGCAAAGCT GCGTGGGGCC GCGTACCCGG CTGGAAGTGG TGACAGAAGG CGTATTGACC
AGAATGATTC AGCGCGATCC CGAATTACGC GGCGTGGGGC TGGTGATACT GGATGAATTT
CATGAGCGCA GTTTACAGGC GGATTTAGCG TTGGCGCTGT TGCTGGATAT CCAGCAAGGG
CTCCGTGACG ATCTCAGGCT GTTAATTATG TCTGCGACGC TGGATAACGA CAGGCTTTGT
CAGCGACTGC CTGATGCGCC GACGATCGTC TCGGAGGGGC GCGCGTTCCC GGTGGAGCGA
CGTTATCAGC CGCTCGCGGC GCATTTGCGT TTTGATGAAG CCGTCGCGAT GGCGACAGCG
GAACTGCTGC GCAATGAAAA CGGTTCGCTG CTGCTATTTT TACCCGGCGT AGGCGAAATA
CAGCGCGTTC ATGAACATCT GGCGTCGCGG GTAGGGAGCG ATGTCCTGCT TTGTCCTCTG
TATGGCGCAT TGTCTTTGGA GGCGCAACGC AAAGCGATTG TTCCCGCCCC CGCCGGGATG
CGTAAAGTGG TATTGGCGAC TAACATTGCC GAAACCAGTT TGACGATTGA AGGGATTCGT
CTGGTCGTCG ATAGCGCTCA GGAGCGCGTG GCGCGATTTG ACGCGCGAAC GGGACTGACG
CGGCTGGTTA CGCAGCGTAT CAGTCAGGCA TCAATGACGC AGCGCGCGGG GCGCGCCGGA
CGACTGGCGC CGGGGATCTG TTTACATCTG CTGGCCAAAG AACAGGCGGA GCGGGCGGCG
GCGCAAAGCG ATCCGGAAAT CTTACACAGC GACCTTTCCG GTTTATTGAT GGAGGTGTTG
CAGTGGGGAT GTCACGATCC GGCATCGCTT TTCTGGCTGG ACAGGCCGCC GGAGGTGAAT
CTTCAGGCCG CCCGCCGTTT ATTATTGATG TTAGGCGCGC TGGAGGGCGA GCGGTTAAGC
GCGCGGGGCC GGAAAATGGC GGCAACAGGT AACGATCCGC GCCTGGCGGC GATGTTAGTC
AACGCTGGCG AGGGCGATAG CGCCGCCACT GCCGCCATGC TCGCGGCCAT CCTTGAGGAC
CCGCCGCGCG GCGGCGGTAC GGATTTAAGC GTAGTATTTT CGCGGCGACA GCCGGGCTGG
CAGCAGCGTA GCCAGCAGCT TTTAAAACGG CTGCAGGTGC GTAATGGCGA GCCGGATAGC
GCGCTTATTA TGCCGCTGTT GGCCAGAGCG TTTAGCGACC GCATCGCGCG GCGTCGTGGT
CAGGAAGGGC GCTATCAGTT AGCCAATGGT ATGGGCGCGA TGTTAGATGC GGATGACGCG
TTGGGACGTC ATGAATGGCT GATCGCGCCG CTGTTACTGC AAGGTAGCGC CTCGCCGGAC
GCCCGAATAT TGTTGGCGCA GCCGCTGGAT ATTGCCTCGC TGATTCAGGC GTGTCCTGAT
TTACTGCGCC AGTCCGACAC GGTTGAATGG GACGAGGCGC AGGGAACGTT GAAAGCATGG
CGCAGAATGC GTATTGGACA GTTGACGGTT AGCGTTCAGC CACTGGCGAA GCCGTCTGAA
GAGGAGCTTC ATCAGGCGAT GCTGAACGGC ATCCGCGATA AAGGTCTGTC CGTCCTTAAC
TGGACGCCGG AAGCGGAGCA GTTCCGTCTG CGTCTGCACT GTGCGGCGAA ATGGCTGCCG
GAATATGACT GGCCTGCCGT GGATGAGGCG TCGCTGCTGG CGACTCTGGA AAATTGGTTG
CTGCCGCACA TGACAGGCGT ACAGTCGTTA CGGAGTCTGA AATCTCTGAA TGTGACTCAG
GCGTTACGGG GACTGCTTGA CTATGCCATG CTGCAACGTC TGGATAGTGA ACTGCCTGGG
CATTACACTG TGCCGACGGG AAGCCGAATA ACGATTCGTT ATCATGAAGA TAACCCGCCC
GCGCTGGCGG TCAGAATGCA GGAAATGTTT GGCGAAGCGA AGACCCCAAC CATCGCTCAG
GGCCGCGTGC CGCTGGTGCT GGAACTGCTT TCGCCAGCGC AGCGACCGCT ACAGATTACG
CGCGATTTAA GCGCTTTCTG GCAAGGGGCG TATCGCGAAG TGCAAAAAGA GATGAAGGGC
CGTTACCCCA AACATGTCTG GCCGGACGAT CCGGCGAATA CGGCCCCAAC GCGGCGCACG
AAGAAGTATT CGTGA
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| Protein sequence | MLQCGAKKVN PVEPFVTSLP VAAVLPELLT ALKTAPQVLL SAPTGAGKST WLPLQLLQQG
PVAGKILLLE PRRLAARNVA QRLAEALNEK PGETVGYRMR AQSCVGPRTR LEVVTEGVLT
RMIQRDPELR GVGLVILDEF HERSLQADLA LALLLDIQQG LRDDLRLLIM SATLDNDRLC
QRLPDAPTIV SEGRAFPVER RYQPLAAHLR FDEAVAMATA ELLRNENGSL LLFLPGVGEI
QRVHEHLASR VGSDVLLCPL YGALSLEAQR KAIVPAPAGM RKVVLATNIA ETSLTIEGIR
LVVDSAQERV ARFDARTGLT RLVTQRISQA SMTQRAGRAG RLAPGICLHL LAKEQAERAA
AQSDPEILHS DLSGLLMEVL QWGCHDPASL FWLDRPPEVN LQAARRLLLM LGALEGERLS
ARGRKMAATG NDPRLAAMLV NAGEGDSAAT AAMLAAILED PPRGGGTDLS VVFSRRQPGW
QQRSQQLLKR LQVRNGEPDS ALIMPLLARA FSDRIARRRG QEGRYQLANG MGAMLDADDA
LGRHEWLIAP LLLQGSASPD ARILLAQPLD IASLIQACPD LLRQSDTVEW DEAQGTLKAW
RRMRIGQLTV SVQPLAKPSE EELHQAMLNG IRDKGLSVLN WTPEAEQFRL RLHCAAKWLP
EYDWPAVDEA SLLATLENWL LPHMTGVQSL RSLKSLNVTQ ALRGLLDYAM LQRLDSELPG
HYTVPTGSRI TIRYHEDNPP ALAVRMQEMF GEAKTPTIAQ GRVPLVLELL SPAQRPLQIT
RDLSAFWQGA YREVQKEMKG RYPKHVWPDD PANTAPTRRT KKYS
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