Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0205 |
Symbol | |
ID | 6484867 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 219902 |
End bp | 220432 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642735642 |
Product | 2'-5' RNA ligase |
Protein accession | YP_002039424 |
Protein GI | 194443182 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1514] 2'-5' RNA ligase |
TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 77 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTGAGC CAAAACGGCT GTTTTTTGCG ATTGACTTAC CCGACGACGC GCGCACACAA ATTATCGCCT GGCGCGCCGC CCATTTTGCG TCTGAAGACG GACGCCCCGT CGCAGCGGCG AACCTACACC TGACGCTGGC CTTTTTAGGC GACGTCAGTA GCGATAAGCG GCGCGCGCTT GCGCAACTGG CCGGACGAAT TCGCCAGCCG GGCTTTACGC TACATCTGGA TGACGCCGGT CAGTGGCTGC GTTCACGCGT GGTGTGGCTG GGGATGCGCC AGCCGCCGCG CGGGTTGTTG CAGTTGGCTA ATATGCTGCG CGCGCAGGCC GCCCGCAGCG GTTGTTACCA AAGCCCGCAG CCTTTTCACC CGCATATTAC GCTGCTGCGC GACGCCAGCC ATACGGTGGC TATCCCGCCG CCGGGCTTTT GCTGGTCATT TCCGGTCACG TCGTTTGCAC TTTACGCCTC TTCGTATGGG CAAGGCCGTA CCCGCTATGC CGAGCTGCAG CGCTGGACGC TGGGCGAATA A
|
Protein sequence | MSEPKRLFFA IDLPDDARTQ IIAWRAAHFA SEDGRPVAAA NLHLTLAFLG DVSSDKRRAL AQLAGRIRQP GFTLHLDDAG QWLRSRVVWL GMRQPPRGLL QLANMLRAQA ARSGCYQSPQ PFHPHITLLR DASHTVAIPP PGFCWSFPVT SFALYASSYG QGRTRYAELQ RWTLGE
|
| |