Gene SNSL254_A0205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0205 
Symbol 
ID6484867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp219902 
End bp220432 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content62% 
IMG OID642735642 
Product2'-5' RNA ligase 
Protein accessionYP_002039424 
Protein GI194443182 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1514] 2'-5' RNA ligase 
TIGRFAM ID[TIGR02258] 2'-5' RNA ligase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAGC CAAAACGGCT GTTTTTTGCG ATTGACTTAC CCGACGACGC GCGCACACAA 
ATTATCGCCT GGCGCGCCGC CCATTTTGCG TCTGAAGACG GACGCCCCGT CGCAGCGGCG
AACCTACACC TGACGCTGGC CTTTTTAGGC GACGTCAGTA GCGATAAGCG GCGCGCGCTT
GCGCAACTGG CCGGACGAAT TCGCCAGCCG GGCTTTACGC TACATCTGGA TGACGCCGGT
CAGTGGCTGC GTTCACGCGT GGTGTGGCTG GGGATGCGCC AGCCGCCGCG CGGGTTGTTG
CAGTTGGCTA ATATGCTGCG CGCGCAGGCC GCCCGCAGCG GTTGTTACCA AAGCCCGCAG
CCTTTTCACC CGCATATTAC GCTGCTGCGC GACGCCAGCC ATACGGTGGC TATCCCGCCG
CCGGGCTTTT GCTGGTCATT TCCGGTCACG TCGTTTGCAC TTTACGCCTC TTCGTATGGG
CAAGGCCGTA CCCGCTATGC CGAGCTGCAG CGCTGGACGC TGGGCGAATA A
 
Protein sequence
MSEPKRLFFA IDLPDDARTQ IIAWRAAHFA SEDGRPVAAA NLHLTLAFLG DVSSDKRRAL 
AQLAGRIRQP GFTLHLDDAG QWLRSRVVWL GMRQPPRGLL QLANMLRAQA ARSGCYQSPQ
PFHPHITLLR DASHTVAIPP PGFCWSFPVT SFALYASSYG QGRTRYAELQ RWTLGE