| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0196 |
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| Symbol | |
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| ID | 6483991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 211946 |
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| End bp | 213175 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642735633 |
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| Product | polysaccharide deacetylase domain protein |
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| Protein accession | YP_002039415 |
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| Protein GI | 194443969 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 83 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTATGC GCGTTGTTCT TATCTTGCTG TTCTTTTTCG CCGGTAATGT GTTGGCTGCC
TTGCCCGCTC GTTATATGCA AACGACGAAA GATGCCGCCA TCTGGTCGCA GATTGGCGAC
AAAATGGTGA CCGTAGGGAA TATCCGCGCC GGACAAATTC TTTCCGTAAC GCCTGTTGCG
GCTGATTATT ATGCCTTTAA ATTCGGCTTC GGTGTGGGGT TTATCGATAA AGGCCATCTG
GAATCCGTGC AGGGAAAACA AAAAGTGGAA GATGGCCTGG GCGATCTTAA CAAGCCGCTC
AGCAATCAGA ATCTGGTGAC CTGGAAGGAC ACGCCGGTGT ATAACGCGCC GGACATCAGT
AGCGCCCCGT TTGGCGTATT GGTGGATAAT TTGCGTTACC CCATTATTAG CAAGCTGAAA
GGCCGGCTAC ATCAAACCTG GTATCAGATC CGTATTGGCG ACAGGCTGGC TTATGTCAGC
GCCATGGATG CGCAGGAAGA CAACGGCATT CCGATTTTGA CCTATCATCA CATCTTACGT
GATGAAGAGA ATACTCGTTT TCGCCATACG TCCACCACGA CTTCGGTTCG GGCATTCAGC
AACCAAATGA CCTGGCTTCG CGATCGCGGC TATGCCACGT TGACGATGTA CCAACTGGAG
GATTACATCC ATAACCGCGC GAATTTCCCG GCGCGCGCGG TGGTTATCAC CTTTGACGAT
GGCCTTAAAT CGGTGAGTCG CTATGCATAT CCGGTATTAA AGCAGTACGA TATGAAAGCG
ACGGCATTTA TTATCTCATC GCGTATTAAG CGCCATCCGC AAACATGGAA TCCCAGGTCG
CTGCAATTTA TGAGCGTGTC CGAATTGCGC AAGATAAGCG ATGTTTTTGA TTTTCAGTCG
CATACCCATT TTTTACACCG GGTAGACGGG CATCGCCGCC CGATTTTATA TAGCCGCAGC
TACCATAATA TTCTGTTTGA TTTTGAACGT TCGCGGAGGG CGCTCACACA GTTTACTCCG
CACGTATTTT ATCTTTCTTA TCCCTTTGGC GGCTATAACG CGACCGCGAT CAAAGCAGCA
AAAGACGCCG GTTTCCATCT GGCGGTCACC ACGGTGAGAG GGAAGGTGAA GCCGGGAGAT
AATCCGATGC TGCTCAAAAG GCTGTATATT CTGCGCACGG ATTCGCTGGA AACCATGTCG
CGGCTGATCA GCAACCAGCC GCAGGGATAA
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| Protein sequence | MVMRVVLILL FFFAGNVLAA LPARYMQTTK DAAIWSQIGD KMVTVGNIRA GQILSVTPVA
ADYYAFKFGF GVGFIDKGHL ESVQGKQKVE DGLGDLNKPL SNQNLVTWKD TPVYNAPDIS
SAPFGVLVDN LRYPIISKLK GRLHQTWYQI RIGDRLAYVS AMDAQEDNGI PILTYHHILR
DEENTRFRHT STTTSVRAFS NQMTWLRDRG YATLTMYQLE DYIHNRANFP ARAVVITFDD
GLKSVSRYAY PVLKQYDMKA TAFIISSRIK RHPQTWNPRS LQFMSVSELR KISDVFDFQS
HTHFLHRVDG HRRPILYSRS YHNILFDFER SRRALTQFTP HVFYLSYPFG GYNATAIKAA
KDAGFHLAVT TVRGKVKPGD NPMLLKRLYI LRTDSLETMS RLISNQPQG
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