Gene SNSL254_A0195 details

Gene Information

• Locus tag: SNSL254_A0195
• ID: 6484677
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Newport str. SL254
• Kingdom: Bacteria
• Replicon accession: NC_011080
• Strand: +
• Start bp: 211444
• End bp: 211884
• Gene Length: 441 bp
• Protein Length: 146 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 642735632
• Product: PTS system transporter subunit IIA
• Protein accession: YP_002039414
• Protein GI: 194443994
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG2893] Phosphotransferase system, mannose/fructose-specific component IIA

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 86
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCTGGGAT GGGTCATTTC CTGTCATGAC GATCGGGCGC AGGAAATGCT CGAAGGTCTT 
GAAAAGAAGT ATGGGCCGTT GGCGCAGTGT CGGGCGGTCA ATTTCTGGCG TGGGTTAAGC 
GTAAATATGC TCAGCCGCAT GATGTGTGAC GCCCTCCATG CCACCGACTC CGGTGAAGGC 
GTGATATTTT TAACCGACAT TTCCGGCGCG GCGCCTTATC GTGTAGCGTC GCTGATGAGC 
CATAAACATT CTCAATGTGA AGTTATTTCC GGTGTTAGCT ATTCATTGAT GGAGGAAATG 
ATTACCTGGC GAGAGTCAAT GAGCAGTTCA GCATTTCGCG ACCAGATTGT CGCGCTTGGC 
GCGCCGGATG TCACCAGTCT CTGGCATCAG CAGCAGAAAA ATCCGCCTTT TGTATTGCTG 
CATGATTCGT ATGAGTTTTG A 

 

Protein sequence

MLGWVISCHD DRAQEMLEGL EKKYGPLAQC RAVNFWRGLS VNMLSRMMCD ALHATDSGEG 
VIFLTDISGA APYRVASLMS HKHSQCEVIS GVSYSLMEEM ITWRESMSSS AFRDQIVALG 
APDVTSLWHQ QQKNPPFVLL HDSYEF