Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0189 |
Symbol | |
ID | 6484937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 205256 |
End bp | 206026 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642735626 |
Product | ABC transporter permease protein |
Protein accession | YP_002039408 |
Protein GI | 194446591 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 98 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCAGC TTTACTGGGT TGCCCTTAAA AGCATCTGGG CGAAAGAGAT CCACCGCTTT ATGCGGATCT GGGTACAAAC GCTGGTGCCG CCTGTCATCA CCATGACGCT CTATTTTATT ATTTTCGGTA ACCTGATTGG TTCGCGCATC GGCGAAATGC ATGGTTTTAG CTATATGCAA TTTATTGTGC CGGGCCTGAT TATGATGGCG GTCATTACTA ACTCCTACGC GAATGTCGCG TCGTCATTTT TTAGCGCCAA GTTTCAGCGC AATATTGAGG AACTGCTGGT CGCGCCGGTG CCAACGCACG TGATCATCGC CGGATTTGTC GGCGGCGGCG TAGCGCGCGG GCTGTGCGTA GGGATTCTGG TGACGGCGAT TTCGCTCTTT TTCGTGCCTT TCCAGGTGCA TTCCTGGGTA TTTGTCGCGC TAACGCTGAT TCTGACCGCG ATTCTGTTCT CGCTGGCCGG ACTGCTGAAC GCCGTGTTTG CGAAAACCTT TGACGATATC AGTCTGATCC CGACCTTTGT GCTGACGCCG CTGACCTACC TCGGCGGGGT ATTTTACTCG CTGACGCTGC TGCCGCCGTT CTGGCAAGGG CTGTCGCACC TGAACCCGAT CGTCTACATG ATCAGCGGTT TCCGTTATGG TTTTCTGGGT ATCCATGATG TGCCGCTGGT GACGACGTTT GGCGTACTGG TGATCTTTAT CGCTGCTTTC TATCTGCTGT GTTGGTCGCT GATCCAGCGC GGGCGCGGGT TGCGCAGTTA A
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Protein sequence | MMQLYWVALK SIWAKEIHRF MRIWVQTLVP PVITMTLYFI IFGNLIGSRI GEMHGFSYMQ FIVPGLIMMA VITNSYANVA SSFFSAKFQR NIEELLVAPV PTHVIIAGFV GGGVARGLCV GILVTAISLF FVPFQVHSWV FVALTLILTA ILFSLAGLLN AVFAKTFDDI SLIPTFVLTP LTYLGGVFYS LTLLPPFWQG LSHLNPIVYM ISGFRYGFLG IHDVPLVTTF GVLVIFIAAF YLLCWSLIQR GRGLRS
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