Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0188 |
Symbol | |
ID | 6485300 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 204333 |
End bp | 205259 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642735625 |
Product | ABC transporter ATP-binding protein |
Protein accession | YP_002039407 |
Protein GI | 194444904 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.608048 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 100 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATTG CGCTGGAACT TCAACAACTT AAAAAAACCT ATCCCGGCGG CGTTCAGGCG CTGCGCGGCA TAGATTTGCA GGTCGAAGCG GGGGATTTTT ACGCGCTTCT GGGGCCAAAT GGAGCAGGGA AATCGACCAC CATCGGTATT ATCAGCTCAT TGGTTAATAA AACGTCCGGG CGCGTTAACG TTTTTGGTTA CGACCTGGAA AAAGACGTGG TTAACGCCAA GCGACAGCTT GGACTGGTGC CACAGGAGTT TAACTTTAAC CCGTTTGAAA CGGTGCAACA GATCGTAGTG AATCAGGCCG GTTATTACGG CGTGGAGCAT AAAGAGGCGG TTTTACGTAG CGAAAAGTAT TTAAAACAAC TCGATCTGTG GGAAAAACGT CATGAACGCG CGCGGATGCT CTCCGGTGGG ATGAAGCGCC GCCTGATGAT CGCCCGCGCG CTGATGCATG AGCCTAAACT ATTGATTCTC GATGAGCCGA CGGCGGGCGT CGATATCGAA TTGCGTCGCT CGATGTGGGG ATTCCTGAAA GACTTAAACG CCAAAGGCAC CACCATTATT CTCACCACCC ACTATCTGGA AGAGGCGGAA ATGCTGTGCC GCAATATCGG TATTATTCAG CACGGCGAGC TGGTGGAAAA TACCTCCATG AAAAATCTGC TTTCAAAGCT GAAATCGGAG ACGTTTATTC TGGATTTAGC GCCAAAAAGC CCGCTACCTA AGCTTACGGG TTATCAATAT CGTCTGGTGG ATACCTCGAC TCTGGAGGTG GAAGTGTTAC GCGAGCAGGG GGTTAACAGT GTCTTTAGCC AACTGAGCGA GCAGGGGGTT CAGGTATTAA GTATGCGTAA TAAAGCCAAC CGTCTGGAAG AACTGTTTGT GTCGCTGGTG CATGAAAAAC AAGGAGATCG CGCATGA
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Protein sequence | MTIALELQQL KKTYPGGVQA LRGIDLQVEA GDFYALLGPN GAGKSTTIGI ISSLVNKTSG RVNVFGYDLE KDVVNAKRQL GLVPQEFNFN PFETVQQIVV NQAGYYGVEH KEAVLRSEKY LKQLDLWEKR HERARMLSGG MKRRLMIARA LMHEPKLLIL DEPTAGVDIE LRRSMWGFLK DLNAKGTTII LTTHYLEEAE MLCRNIGIIQ HGELVENTSM KNLLSKLKSE TFILDLAPKS PLPKLTGYQY RLVDTSTLEV EVLREQGVNS VFSQLSEQGV QVLSMRNKAN RLEELFVSLV HEKQGDRA
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