Gene SNSL254_A0175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0175 
Symbol 
ID6485740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp191755 
End bp192117 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content52% 
IMG OID642735612 
Producthypothetical protein 
Protein accessionYP_002039394 
Protein GI194443951 
COG category[S] Function unknown 
COG ID[COG3112] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0413921 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones108 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTACG AATTTCTGCG CGACGTTACC GGAGGGGTAA AAGTACGAAT GTCGATGGGC 
CACGAGGTGG TCGGTCACTG GTTTAATGAA GAGGTTAAAG ACAACCTCTC GCTACTGGAT
GAAGTAGAAC AAGCCGCGCG TACGGTCAAA GGCAGCGAAC GCTCCTGGCA ACGAGCAGGG
CATGAATACA CGATCTGGAT GGACGGCGAA GAAGTGATGA TTCGCGCCAA TCAACTGGAT
TTTTCCGGCG ATGAGATGGA AGAGGGGATG AGTTATTACG ATGAAGAGAG TTTATCCCTG
TGCGGCATGG AGGATTTTCT ACGGGTCGTC GCCGCGTATC GGGAATTCGT CAGTAAAGCC
TGA
 
Protein sequence
MDYEFLRDVT GGVKVRMSMG HEVVGHWFNE EVKDNLSLLD EVEQAARTVK GSERSWQRAG 
HEYTIWMDGE EVMIRANQLD FSGDEMEEGM SYYDEESLSL CGMEDFLRVV AAYREFVSKA