Gene SNSL254_A0152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0152 
Symbol 
ID6484429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp164245 
End bp164988 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content53% 
IMG OID642735589 
Producthypothetical protein 
Protein accessionYP_002039371 
Protein GI194443863 
COG category[S] Function unknown 
COG ID[COG4582] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0088141 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones91 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACACCC AGGTCCTATT TGAACACCCT CTCAATGAGA AGATGCGTAC GTGGCTGCGC 
ATAGAGTTTT TGATCCAACA GCTCTCCATC AACCTGCCAA TTGCAGACCA TGCTGGCGCA
CTGCATTTTT TCCGTAACAT CAGCGATCTA CTGGATGTGT TCGAACGGGG CGAAGTCCGT
ACCGAACTGC TGAAAGAACT GGAGCGCCAG CAGCGTAAAT TACAGGCCTG GGTTGAGGTT
CCCGGCGTCG ATCAAGACCG TATTGAAGCC CTGCGCCAGC AGTTAAAATC GGCGGGCAGC
GTGCTGATCT CCGCCCCGAG GATTGGCCAG CAGCTACGCG AAGATCGCTT GATTGCCCTT
GTGCGTCAAC GCTTAAGTAT TCCTGGCGGC TGTTGCAGTT TCGATTTACC CACTCTGCAT
ATCTGGTTGC ACCTACAACA GGCGCAGCGC GACGCCCAGA TTGAAACCTG GCTTGCCAGC
CTGAATCCCC TCACCCAGGC GCTGACGCTG GTGCTTGATC TGATCCGTAA TTCAGCGCCT
TTCCGTAAGC AAACCAGCCT GAACGGTTTT TATCAGGATA ACGGGGACGA CGCCGATTTG
CTGCGTCTTA TGCTGACGCT CGATTCACAA CTTTATCCGC AAATTTCCGG CCATAAGAGC
CGTTTTGCCA TTCGCTTTAT GCCGCTGGAT AGTGAAAATG GTCTGGTGCC GGAGCGTCTT
GATTTTGAAC TGGCCTGTTG CTAA
 
Protein sequence
MHTQVLFEHP LNEKMRTWLR IEFLIQQLSI NLPIADHAGA LHFFRNISDL LDVFERGEVR 
TELLKELERQ QRKLQAWVEV PGVDQDRIEA LRQQLKSAGS VLISAPRIGQ QLREDRLIAL
VRQRLSIPGG CCSFDLPTLH IWLHLQQAQR DAQIETWLAS LNPLTQALTL VLDLIRNSAP
FRKQTSLNGF YQDNGDDADL LRLMLTLDSQ LYPQISGHKS RFAIRFMPLD SENGLVPERL
DFELACC