Gene SNSL254_A0104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0104 
Symbol 
ID6486731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp115443 
End bp116063 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content50% 
IMG OID642735547 
Productputative secreted protein 
Protein accessionYP_002039329 
Protein GI194446096 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.900889 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value0.196325 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATATC GCTACATCAC CAGAATCGCG GCAGGCATAA TTCTTATTAT GGCCACGGTG 
TTTATCCATA ACGCTATCGC TATTTATCAG TTCAGTCAGC AAAACCAGAC GCGCGTAGCT
GACTGCGCGA TTGTCGCAGG AGCAGGCGTT AGCGGAAAAA CGCCTTCTCC CGTTTTTCAG
GCCAGACTGG ATCATGCCAT CTGGCTTTAC CAACAACACA TTGTCCGCGC GTTGGTATTA
ACCGGCGGCT ACGGCGCTGG CGCAACGGTT TCCGACGCGG CGATAGCCCG TCAATACGTT
CTGGAAAAAG GGATTCCGGC TAAGGCGATT TTTATTGAAG AGCGCTCTAC CGTGACGCGC
GAAAATATTC GTTACGCAAA ACAGATACTG CGACAACAAC AATGGCGCAC AGCGTTACTG
GTCAGCGATC CGCTGCATAT GCTGCGTCTG AAAACTATCG CTCAGGATAA TGGTATCGAT
AGCCGCTCAT CACCCACGCG ATCCACCCGC TATAAATCCT GGTGGGCGCA AACCCGCTTC
TTACTGCGAG AAACTTTTTA TTACAGCGGA TATCGGCTTT TACGTTATAT GCCTGTACAA
AATAACAGTA TTACCCCCTA A
 
Protein sequence
MKYRYITRIA AGIILIMATV FIHNAIAIYQ FSQQNQTRVA DCAIVAGAGV SGKTPSPVFQ 
ARLDHAIWLY QQHIVRALVL TGGYGAGATV SDAAIARQYV LEKGIPAKAI FIEERSTVTR
ENIRYAKQIL RQQQWRTALL VSDPLHMLRL KTIAQDNGID SRSSPTRSTR YKSWWAQTRF
LLRETFYYSG YRLLRYMPVQ NNSITP