Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0098 |
Symbol | imp |
ID | 6484537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 105775 |
End bp | 108135 |
Gene Length | 2361 bp |
Protein Length | 786 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642735541 |
Product | organic solvent tolerance protein |
Protein accession | YP_002039323 |
Protein GI | 194445274 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1452] Organic solvent tolerance protein OstA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00167743 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 0.0233205 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAC GTATTCCCAC TCTTCTGGCC ACCATGATCG CCAGCGCCCT TTATAGTCAT CAGGGGCTGG CAGCCGATCT CGCCTCACAG TGTATGTTGG GCGTGCCGAG CTACGATCGT CCTCTGGTAA AAGGCGATAC CAACGATCTG CCGGTTACTA TCAATGCCGA TAACGCTAAA GGTAACTACC CGGACGATGC CGTTTTTACC GGCAACGTGG ACATTATGCA GGGGAATAGC CGCCTGCAAG CGGATGAAGT GCAGCTTCAT CAGAAGCAGG CGGAAGGTCA GCCGGAACCT GTACGCACCG TCGATGCGCT GGGTAATGTG CATTATGATG ATAATCAGGT CATCCTTAAA GGGCCGAAGG GCTGGGCGAA CCTGAACACC AAAGACACGA ACGTCTGGGA AGGCGATTAC CAGATGGTGG GCCGTCAGGG GCGCGGTAAA GCCGATCTCA TGAAGCAGCG TGGCGAAAAC CGCTATACCA TTCTGGAAAA CGGCAGCTTT ACCTCCTGTC TGCCTGGCTC CGATACCTGG AGCGTGGTGG GGAGTGAAGT CATCCATGAC CGTGAAGAAC AGGTTGCGGA GATCTGGAAC GCCCGGTTTA AAGTAGGTCC GGTTCCGATC TTTTATAGCC CCTATTTACA GCTCCCCGTC GGTGACAAAC GTCGCTCAGG TTTCCTGATC CCGAACGCGA AATACACGAC CAAGAACTAT TTCGAGTTCT ACTTACCGTA TTACTGGAAC ATCGCGCCCA ATATGGACGC CACCATCACC CCGCACTATA TGCACCGCCG CGGCAATATT ATGTGGGAGA ACGAATTCCG TTATCTCACG CAGGCAGGCG CCGGGTTGAT GGAATTAGAT TATCTGCCTT CTGATAAAGT CTACGAGGAC GATCATCCCA AAGAGGGCGA TAAGCACCGC TGGTTATTCT ACTGGCAGCA CTCAGGCGTG ATGGATCAGG TGTGGCGTTT TAACGTCGAT TACACCAAAG TCAGCGACTC CAGCTACTTT AACGATTTCG ACAGTAAGTA CGGTTCCAGT ACCGACGGCT ACGCAACGCA GAAATTCAGC GTCGGCTACG CCGTACAAAA CTTTGACGCT ACGGTGTCGA CCAAACAATT CCAGGTCTTT AACGATCAAA ACACCAGCAG CTACTCTGCG GAGCCGCAGT TAGACGTTAA CTACTACCAT AACGATCTCG GGCCGTTTGA TACCCGGATT TACGGCCAGG CGGTACATTT CGTCAACACC AAAGACAATA TGCCGGAAGC GACCCGCGTC CACCTGGAGC CAACCATTAA TTTGCCGCTC TCCAACCGCT GGGGCAGCCT GAACACCGAA GCGAAGCTGA TGGCGACGCA CTATCAGCAA ACGAATCTGG ACAGCTATAA CAGCGATCCA AACAATAAAA ATAAGCTGGA AGATTCGGTT AACCGCGTCA TGCCGCAGTT TAAAGTCGAC GGTAAGCTCA TCTTCGAACG CGATATGGCG ATGCTGGCGC CGGGGTATAC CCAGACGCTG GAACCACGCG TGCAGTACCT GTATGTGCCG TACCGCGACC AGAGCGGCAT CTATAACTAC GATTCTTCTT TGCTGCAATC CGACTATAAC GGCCTGTTCC GCGACCGCAC TTATGGCGGT CTCGACCGTA TTGCTTCCGC CAACCAGGTC ACGACCGGCG TCACAACACG CATTTATGAT GATGCCGCCG TTGAACGTTT TAACGTTTCT GTTGGTCAAA TCTACTATTT CACGGAGTCT CGCACCGGCG ATGACAACAT TAAATGGGAG AATGACGACA AAACCGGTTC GCTGGTTTGG GCAGGCGACA CTTACTGGCG TATTTCAGAA CGCTGGGGGC TGCGTAGCGG AGTGCAGTAC GATACCCGTC TGGATAGCGT CGCTACCAGC AGCAGCAGCC TCGAATACCG TCGGGATCAG GATCGTCTGG TACAGTTGAA CTACCGCTAT GCCAGCCCGG AATATATTCA GGCTACGTTG CCTTCGTATT ATTCCACGGC AGAGCAGTAT AAAAACGGCA TCAACCAGGT GGGCGCGGTG GCAAGTTGGC CGATTGCCGA TCGCTGGTCG ATTGTCGGCG CGTACTACTT CGATACCAAT TCGAGCAAAC CTGCAGACCA GATGCTCGGC TTGCAGTACA ACTCTTGCTG CTATGCGATC CGCGTCGGAT ACGAACGTAA GCTGAACGGT TGGGATAACG ATAAACAACA CGCGATTTAT GATAACGCGA TTGGCTTCAA CATTGAGCTG CGCGGTTTGA GCTCTAACTA CGGCCTCGGC ACGCAAGAAA TGTTGCGTTC GAACATTCTG CCGTACCAAA GCTCTATGTA A
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Protein sequence | MKKRIPTLLA TMIASALYSH QGLAADLASQ CMLGVPSYDR PLVKGDTNDL PVTINADNAK GNYPDDAVFT GNVDIMQGNS RLQADEVQLH QKQAEGQPEP VRTVDALGNV HYDDNQVILK GPKGWANLNT KDTNVWEGDY QMVGRQGRGK ADLMKQRGEN RYTILENGSF TSCLPGSDTW SVVGSEVIHD REEQVAEIWN ARFKVGPVPI FYSPYLQLPV GDKRRSGFLI PNAKYTTKNY FEFYLPYYWN IAPNMDATIT PHYMHRRGNI MWENEFRYLT QAGAGLMELD YLPSDKVYED DHPKEGDKHR WLFYWQHSGV MDQVWRFNVD YTKVSDSSYF NDFDSKYGSS TDGYATQKFS VGYAVQNFDA TVSTKQFQVF NDQNTSSYSA EPQLDVNYYH NDLGPFDTRI YGQAVHFVNT KDNMPEATRV HLEPTINLPL SNRWGSLNTE AKLMATHYQQ TNLDSYNSDP NNKNKLEDSV NRVMPQFKVD GKLIFERDMA MLAPGYTQTL EPRVQYLYVP YRDQSGIYNY DSSLLQSDYN GLFRDRTYGG LDRIASANQV TTGVTTRIYD DAAVERFNVS VGQIYYFTES RTGDDNIKWE NDDKTGSLVW AGDTYWRISE RWGLRSGVQY DTRLDSVATS SSSLEYRRDQ DRLVQLNYRY ASPEYIQATL PSYYSTAEQY KNGINQVGAV ASWPIADRWS IVGAYYFDTN SSKPADQMLG LQYNSCCYAI RVGYERKLNG WDNDKQHAIY DNAIGFNIEL RGLSSNYGLG TQEMLRSNIL PYQSSM
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