Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0095 |
Symbol | ksgA |
ID | 6483205 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 102628 |
End bp | 103449 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642735538 |
Product | dimethyladenosine transferase |
Protein accession | YP_002039320 |
Protein GI | 194446536 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.12943 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 0.356513 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAATC GAGTCCATCA GGGCCATTTA GCCCGTAAAC GCTTCGGGCA AAACTTTCTC AACGATCGGT TTGTGATCGA CAGTATTGTT TCTGCTATTA ATCCGCAAAA AGGCCAGGCG ATGGTTGAAA TCGGCCCCGG CCTGGCGGCG CTGACGGAGC CGGTCGGCGA ACGACTGGAT AAGCTCACGG TCATTGAACT TGACCGCGAT CTGGCGGCGC GTTTGCAAAC CCATCCGTTT TTAGGGCCGA AGCTGACTAT TTATCAGCAG GACGCCATGA CCATGAACTT TGGCGAACTG TCTGCGCAGT TGGGCCAACC GCTGCGTGTG TTCGGCAATC TGCCCTATAA TATCTCCACC CCGCTGATGT TCCATCTCTT TAGCTATACT GATGCCATTG CCGACATGCA CTTTATGTTG CAAAAAGAAG TGGTAAATCG TCTGGTTGCA GGGCCGAACA GCAAAGCGTA TGGTCGTTTA AGCGTGATGG CGCAATATTA CTGTCAGGTG ATCCCGGTGC TTGAAGTGCC GCCATCCGCC TTCACGCCGC CGCCCAAAGT GGACTCCGCC GTGGTGCGTC TGGTTCCACA CGCAACAATG CCTTACCCGG TTAAAGATAT TCGCGTGTTG AGCCGTATTA CCACCGAGGC CTTTAACCAG CGCCGTAAAA CGATCCGTAA CAGTCTCGAC AATCTTTTTA GCGTTGAGAC GTTAACGGAA ATGGGTATTG ACCCGGCAAT GCGCGCGGAA AATATCTCTG TCGCGCAGTA CTGCCAGATG GCCAACTATC TGTCGGAAAA CGCGCCTTTG AAGGAGAGTT AA
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Protein sequence | MNNRVHQGHL ARKRFGQNFL NDRFVIDSIV SAINPQKGQA MVEIGPGLAA LTEPVGERLD KLTVIELDRD LAARLQTHPF LGPKLTIYQQ DAMTMNFGEL SAQLGQPLRV FGNLPYNIST PLMFHLFSYT DAIADMHFML QKEVVNRLVA GPNSKAYGRL SVMAQYYCQV IPVLEVPPSA FTPPPKVDSA VVRLVPHATM PYPVKDIRVL SRITTEAFNQ RRKTIRNSLD NLFSVETLTE MGIDPAMRAE NISVAQYCQM ANYLSENAPL KES
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