Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0077 |
Symbol | caiA |
ID | 6482574 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 85321 |
End bp | 86463 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642735520 |
Product | crotonobetainyl-CoA dehydrogenase |
Protein accession | YP_002039302 |
Protein GI | 194443251 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.214032 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 74 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTTCA ACTTAAATGA CGAACAGGAG CTGTTTGTCG CCGGTATTCG CGAACTGATG GCCAGTGAGA ACTGGGAAGC TTATTTTGCC GAGTGCGATC GTGACAGCGT CTACCCTGAG CGTTTTGTAA AAGCGCTGGC GGATATGGGT ATTGATAGCC TGCTGATCCC GGAGGAACAC GGCGGTCTGG AAGCGGGTTT TGTTACCGTC GCCGCCGTCT GGATGGAGCT GGGACGTCTT GGCGCGCCAA CTTACGTGTT GTACCAATTG CCGGGAGGTT TTAACACTTT CCTGCGTGAA GGAACTCAGG AGCAAATTGA TAAAATCATG GCGTTCCGGG GCACCGGTAA GCAGATGTGG AACTCTGCTA TCACTGAACC GGGAGCGGGA TCGGATGTTG GTAGTCTGAA AACCACTTAT ACACGCAAAA ATGGTAAGGT TTATCTTAAT GGCAGTAAGT GCTTTATCAC CAGTAGCGCC TATACCCCGT ACATCGTGGT CATGGCGAGA GACGGTGCAT CGCCGGATAA ACCGGTTTAC ACCGAGTGGT TTGTGGACAT GAGCAAAGCG GGTATCAAGG TCAACAAACT GGAGAAACTC GGTCTGCGCA TGGATAGCTG CTGTGAAATC ACCTTTGACG ACGTTGAACT GGACGAGAAA GACATGTTCG GTCGGGAAGG TAACGGCTTC AACCGCGTGA AAGAAGAGTT TGACCATGAA CGCTTCCTCG TCGCGCTGAC CAACTACGGT ACCGCAATGT GCGCTTTTGA AGACGCTGCG CGTTACGCGA ATCAGCGCGT GCAGTTTGGT GAAGCTATTG GCCGTTTCCA GCTGATTCAG GAGAAGTTTG CGCATATGGC GATCAAACTG AACTCCATGA AAAATATGCT GCTGGAAGCC GCGTGGAAAG CGGATAACGG CACCATTACC TCCGGCGACG CGGCAATGTG CAAATACTTC TGCGCCAACG CCGCGTTTGA AGTGGTAGAC ACCGCCATGC AGGTACTGGG AGGTGTTGGT ATCGCGGGCA ACCACCGCAT CACGCGTTTC TGGCGTGACC TGCGCGTTGA CCGTGTTTCT GGTGGTTCTG ACGAAATGCA GATCCTGACG TTGGGTCGTG CGGTACTCAA GCAATACCGC TAA
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Protein sequence | MDFNLNDEQE LFVAGIRELM ASENWEAYFA ECDRDSVYPE RFVKALADMG IDSLLIPEEH GGLEAGFVTV AAVWMELGRL GAPTYVLYQL PGGFNTFLRE GTQEQIDKIM AFRGTGKQMW NSAITEPGAG SDVGSLKTTY TRKNGKVYLN GSKCFITSSA YTPYIVVMAR DGASPDKPVY TEWFVDMSKA GIKVNKLEKL GLRMDSCCEI TFDDVELDEK DMFGREGNGF NRVKEEFDHE RFLVALTNYG TAMCAFEDAA RYANQRVQFG EAIGRFQLIQ EKFAHMAIKL NSMKNMLLEA AWKADNGTIT SGDAAMCKYF CANAAFEVVD TAMQVLGGVG IAGNHRITRF WRDLRVDRVS GGSDEMQILT LGRAVLKQYR
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