Gene SNSL254_A0077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0077 
SymbolcaiA 
ID6482574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp85321 
End bp86463 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content53% 
IMG OID642735520 
Productcrotonobetainyl-CoA dehydrogenase 
Protein accessionYP_002039302 
Protein GI194443251 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.214032 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTCA ACTTAAATGA CGAACAGGAG CTGTTTGTCG CCGGTATTCG CGAACTGATG 
GCCAGTGAGA ACTGGGAAGC TTATTTTGCC GAGTGCGATC GTGACAGCGT CTACCCTGAG
CGTTTTGTAA AAGCGCTGGC GGATATGGGT ATTGATAGCC TGCTGATCCC GGAGGAACAC
GGCGGTCTGG AAGCGGGTTT TGTTACCGTC GCCGCCGTCT GGATGGAGCT GGGACGTCTT
GGCGCGCCAA CTTACGTGTT GTACCAATTG CCGGGAGGTT TTAACACTTT CCTGCGTGAA
GGAACTCAGG AGCAAATTGA TAAAATCATG GCGTTCCGGG GCACCGGTAA GCAGATGTGG
AACTCTGCTA TCACTGAACC GGGAGCGGGA TCGGATGTTG GTAGTCTGAA AACCACTTAT
ACACGCAAAA ATGGTAAGGT TTATCTTAAT GGCAGTAAGT GCTTTATCAC CAGTAGCGCC
TATACCCCGT ACATCGTGGT CATGGCGAGA GACGGTGCAT CGCCGGATAA ACCGGTTTAC
ACCGAGTGGT TTGTGGACAT GAGCAAAGCG GGTATCAAGG TCAACAAACT GGAGAAACTC
GGTCTGCGCA TGGATAGCTG CTGTGAAATC ACCTTTGACG ACGTTGAACT GGACGAGAAA
GACATGTTCG GTCGGGAAGG TAACGGCTTC AACCGCGTGA AAGAAGAGTT TGACCATGAA
CGCTTCCTCG TCGCGCTGAC CAACTACGGT ACCGCAATGT GCGCTTTTGA AGACGCTGCG
CGTTACGCGA ATCAGCGCGT GCAGTTTGGT GAAGCTATTG GCCGTTTCCA GCTGATTCAG
GAGAAGTTTG CGCATATGGC GATCAAACTG AACTCCATGA AAAATATGCT GCTGGAAGCC
GCGTGGAAAG CGGATAACGG CACCATTACC TCCGGCGACG CGGCAATGTG CAAATACTTC
TGCGCCAACG CCGCGTTTGA AGTGGTAGAC ACCGCCATGC AGGTACTGGG AGGTGTTGGT
ATCGCGGGCA ACCACCGCAT CACGCGTTTC TGGCGTGACC TGCGCGTTGA CCGTGTTTCT
GGTGGTTCTG ACGAAATGCA GATCCTGACG TTGGGTCGTG CGGTACTCAA GCAATACCGC
TAA
 
Protein sequence
MDFNLNDEQE LFVAGIRELM ASENWEAYFA ECDRDSVYPE RFVKALADMG IDSLLIPEEH 
GGLEAGFVTV AAVWMELGRL GAPTYVLYQL PGGFNTFLRE GTQEQIDKIM AFRGTGKQMW
NSAITEPGAG SDVGSLKTTY TRKNGKVYLN GSKCFITSSA YTPYIVVMAR DGASPDKPVY
TEWFVDMSKA GIKVNKLEKL GLRMDSCCEI TFDDVELDEK DMFGREGNGF NRVKEEFDHE
RFLVALTNYG TAMCAFEDAA RYANQRVQFG EAIGRFQLIQ EKFAHMAIKL NSMKNMLLEA
AWKADNGTIT SGDAAMCKYF CANAAFEVVD TAMQVLGGVG IAGNHRITRF WRDLRVDRVS
GGSDEMQILT LGRAVLKQYR