Gene SNSL254_A0041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0041 
Symbol 
ID6483623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp42929 
End bp44176 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content50% 
IMG OID642735485 
Productputative cytoplasmic protein 
Protein accessionYP_002039267 
Protein GI194445725 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value0.241451 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTCTC ACATTAATGT CGATGCTTGC AAAACGCCAG GCTGCAAAAA TCTGGGGATT 
CTGGGGAGCC CAGACTATCT ACCGCAAGGG AAAAATGTTC TCTGTCGAGC GTGCGGTTTT
TTGTTCCCTA TTATCTCAGC CAGATCGCTT AATCTTTTTC GCCAGGCGGC GAATCAACCC
TGGAAAGGTC TGGTGAAGTC CTGTCCGCAT TGTGGCGGGA CGTCGCTGAA AAAATATGGA
TTTTCCACTA AAGGTGAACG GCGTATGTAT TGCCGCCAGT GTAATAAAAC GTTCATCTCC
TATACCGCTA TCAGGAGCGA CGCCAGACAA GAGAACCTTG CCACGTTGAT TGGCGAAGGA
GCGTCGCTAG TTGAAATACG CGCGGCGCTG GCGATAGACA GCACGGGTTT TAGCCGCGAA
TTACAAAAAC TGTCCCGTCG CGCTAATCAA GCGGAACGCG ATTTTGTGTT TCCCGCGTTT
GATATCGCTA TGAGCACGCG GGCGTTTCGT GTGAAATTTA ACGGCGGCGA CAGCAGCTTA
TACGTGCTGG TGACGGCGGA AGAGGAGAGC GGTAAGGTCG TCGCGATCTC AACGAATTAC
TCCGCCCAAC CGGTGGAAGC GGATTATCAA TATCATTCTG ATTACGAAGA ACGACTTCCG
TCCGGCACGC TGGCGCATCT GGTGCAGCGA AAAGAGGCGC TGACCATGCG CCGCAATGTA
TTATTTGATG TGGATTACGG CCCCGCCGTT TTATATAAAA ACGATCCGGG GATGTTAGTA
AAACCCGTAT TACCTGCTTA TCGACATTTT GAGTTGGTTC AGGCGTTGAC GGATGAGCGT
TCCCTGAATG TCCAACATTA TCTCGATCAC GAATGCTTCA TTCTGGGCGG CTGTATGATG
GCGAATTTTA GCTATCTTCG TCAGGGGCGC TGCCATATTT CGTTTGTGCG TGAAAGAGGC
GTTACGCCGC CCAAACGCGA TCTCCCTCCG CGGTTGTTTT TGAGCGGCGG AATTCGCAAC
AACGTCTGGC GTACATTTTC CACACGGGAT TATGCGATGG CGGTATGCAA TCTCACAGGA
AATAAAAAGG TGAGTTTGTT ACGCCATGCG ACGTTAAATA GCGCGACGGC GTTTATTCGC
TATGTTCACA ACCATCCCTT CCTGCCGCAT CTTAACCGGA TGTCTCCTGG CAATGTTGTT
GCCGTACTGG ATTACCTAAA ATTTGAATAT AACGCTTCAC GTAACTGA
 
Protein sequence
MFSHINVDAC KTPGCKNLGI LGSPDYLPQG KNVLCRACGF LFPIISARSL NLFRQAANQP 
WKGLVKSCPH CGGTSLKKYG FSTKGERRMY CRQCNKTFIS YTAIRSDARQ ENLATLIGEG
ASLVEIRAAL AIDSTGFSRE LQKLSRRANQ AERDFVFPAF DIAMSTRAFR VKFNGGDSSL
YVLVTAEEES GKVVAISTNY SAQPVEADYQ YHSDYEERLP SGTLAHLVQR KEALTMRRNV
LFDVDYGPAV LYKNDPGMLV KPVLPAYRHF ELVQALTDER SLNVQHYLDH ECFILGGCMM
ANFSYLRQGR CHISFVRERG VTPPKRDLPP RLFLSGGIRN NVWRTFSTRD YAMAVCNLTG
NKKVSLLRHA TLNSATAFIR YVHNHPFLPH LNRMSPGNVV AVLDYLKFEY NASRN