| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0024 |
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| Symbol | |
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| ID | 6483263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 25105 |
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| End bp | 25791 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642735469 |
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| Product | chaperone protein FimC |
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| Protein accession | YP_002039251 |
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| Protein GI | 194443678 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0267159 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 0.211748 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA ACGTACCGAT TTTCCTTCGA TTATTGCTAC TGCTGTCGGC GGCCGGCCTG
TCGTTTGCCG CGCAGGCGGG AGGCATTGCG CTGGGCGCGA CCAGAGTGAT TTATCCGCAG
GGAAGTAAGC AAACCTCCTT GCCGATTATT AATTCTTCTG CCAGCAATGT TTTTTTAATT
CAGTCATGGG TCGCCAATGC CGATGGTTCA CGCTCGACGG ATTTTATCAT TACGCCGCCT
CTCTTTGTGA TCCAGCCTAA AAAAGAAAAT ATATTACGTA TTATGTATGT CGGGCCGTCA
TTACCGACCG ATCGCGAAAG CGTATTTTAT TTAAACAGTA AAGCGATACC CTCTGTCGAT
AAAAATAAAT TGACCGGCAA CTCCCTGCAA ATTGCGACGC AAAGCGTGAT TAAGCTATTT
ATTCGGCCGA AAAATCTGGC GGAGGCGCCA GCTCATGCCC CGTCGACGCT TCGCTGCCGT
AACGAGCGCG GCCAGCTAAC GATTACTAAC CCTTCGCCGT ACTACGTTTC GATGGTTGAA
CTGTACAGCG CGGGGAAAAA ACTGCCGAAT ACTATGGTAC CGCCGAAAGG CGCGATCACT
CTCCCGGCGA CGCCCGGCCA GGTATCTTTG CGCACGGTAA ACGATTTTGG CGCAACGACG
CCAGCACGCG TTTGTCCAGC TTCATGA
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| Protein sequence | MKKNVPIFLR LLLLLSAAGL SFAAQAGGIA LGATRVIYPQ GSKQTSLPII NSSASNVFLI
QSWVANADGS RSTDFIITPP LFVIQPKKEN ILRIMYVGPS LPTDRESVFY LNSKAIPSVD
KNKLTGNSLQ IATQSVIKLF IRPKNLAEAP AHAPSTLRCR NERGQLTITN PSPYYVSMVE
LYSAGKKLPN TMVPPKGAIT LPATPGQVSL RTVNDFGATT PARVCPAS
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