Gene SNSL254_A0022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0022 
Symbol 
ID6485097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp23329 
End bp24033 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content47% 
IMG OID642735467 
Productputative cytoplasmic protein 
Protein accessionYP_002039249 
Protein GI194444266 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.782422 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value0.262139 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TGATGAACGA CGCTTTTGCT AAAGATAATA ATGAGAATTC ATTACACTCT 
TTTCTTTTTT CTCAGCAGGC TAAACCTCAC GCGGCAATTG ATGCCTTATT TTCGGCCTTG
TTGCCATTTG GTCAACCGTT TACGCTGGGT ATCGGCGATG AGTTTTATTT ACAGGCAAAC
GATGAACACT ACATTGTATT ACTGGAGTCA GGCGTTGTTT CTTTCTGTCA TGATGACAAA
CGACTCCATA TATCTTCATC GTTTGCGCCA TCGGTCGTGG GTATGGTTGA CAGCTATGGC
GCTACCTATA ACGTCCCCGC GCGACCGGAA CACTTTTTGC TCGCAGAAAC GGTTTGTACC
GGTAGATTTG TTCGCCTGCC GGATTTTATA AAAATCGCCG ATGAATGCGA TTTGTGGCAC
GACGTGGCCC GTTGTCTGGC TTACCGTCTG ATGGTGATGA GCGCGCGCGA TCGTGAATTA
GTCGGCGTCG ATTCTTATCT GAAAGTTCGG GCGCTGCTGA CTGAAATCTG GGCTTATCCA
CAGGCCTACC GGGAAAGCAT TATCGTGTTG AATTTTATTC AACGGCGTAC CGGGATATCG
CGCAGTCGGA CCATGAAGAT TCTGTCTGAA CTAAAAAAAG GCGGGTATAT CCATATTGAT
AATGGGCGGC TGACGGCGCT CGGAAAACTG CCAGTGGCGT ATTAA
 
Protein sequence
MKKMMNDAFA KDNNENSLHS FLFSQQAKPH AAIDALFSAL LPFGQPFTLG IGDEFYLQAN 
DEHYIVLLES GVVSFCHDDK RLHISSSFAP SVVGMVDSYG ATYNVPARPE HFLLAETVCT
GRFVRLPDFI KIADECDLWH DVARCLAYRL MVMSARDREL VGVDSYLKVR ALLTEIWAYP
QAYRESIIVL NFIQRRTGIS RSRTMKILSE LKKGGYIHID NGRLTALGKL PVAY