Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0004 |
Symbol | thrC |
ID | 6484714 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 3734 |
End bp | 5020 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642735449 |
Product | threonine synthase |
Protein accession | YP_002039231 |
Protein GI | 194444103 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0498] Threonine synthase |
TIGRFAM ID | [TIGR00260] threonine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.70048 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 80 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTCT ATAATCTGAA AGACCATAAT GAGCAGGTCA GCTTTGCGCA GGCCGTCACG CAAGGACTGG GCAAACAGCA GGGACTTTTT TTTCCGCACG AACTGCCGGA GTTTAGCCTG ACGGAAATTG ATGAGATGCT CAACCAGGAC TTTGTCAGCC GTAGCGCAAA GATCCTCTCG GCATTTATTG GCGATGAAAT ACCGCAGCAA ATTCTGGAAG AGCGCGTCCG CGCGGCGTTT GCGTTCCCGG CGCCGGTAGC GCAGGTAGAA AGCGATGTCG GCTGCCTGGA GCTGTTCCAT GGTCCGACGC TGGCCTTTAA AGACTTCGGC GGGCGTTTTA TGGCGCAAAT GCTGACGCAT ATCAGCGGCG ACAAACCGGT GACGATTCTG ACCGCAACGT CAGGCGATAC CGGCGCGGCG GTGGCTCACG CGTTCTATGG CCTGGAAAAT GTGCGGGTCG TCATTCTCTA CCCGCGCGGT AAAATCAGTC CGTTGCAGGA AAAACTGTTC TGTACGCTGG GCGGCAACAT TGAAACCGTG GCGATCGACG GCGATTTCGA CGCTTGCCAG GCGCTGGTGA AACAGGCATT TGATGACGAA GAACTGAAAA CGGCGCTGGG GCTGAATTCA GCTAATTCGA TTAATATCAG CCGCCTGTTG GCGCAAATTT GCTACTACTT TGAAGCCGTG GCGCAATTGC CGCAGGGGGC GCGTAACCAA CTGGTGATCT CTGTACCCAG CGGCAACTTT GGTGATTTGA CGGCAGGACT GCTGGCGAAG TCGTTAGGCC TACCGGTGAA ACGTTTTATC GCCGCCACCA ACGTCAACGA CACGGTGCCG CGTTTCCTGC ATGACGGGAA GTGGGCGCCG AAAGCGACGC AGGCGACCCT GTCGAATGCG ATGGATGTCA GCCAGCCGAA TAACTGGCCG CGCGTGGAGG AGCTATTCCG CCGTAAAATC TGGCGTCTGA CTGAGCTGGG CTATGCGGCG GTGGATGACA CTACGACACA ACAGACGATG CGCGAGCTGA AAGCGAAAGG TTATATCTCG GAACCTCATG CAGCGGTAGC GTATCGGGCA TTACGCGACC AGTTAAACCC TGGCGAGTAT GGCTTGTTTC TCGGAACGGC GCATCCGGCG AAGTTTAAAG AAAGCGTGGA GTCCATTCTG GGAGAAACGC TGGCCTTGCC TGAAGCGCTC GCCGAACGCG CCGACCTGCC GCTGCTTTCA CATCATCTGC CTGCGGATTT TGCCGCCCTG CGTAAGCTGA TGATGACCCG CCAGTAA
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Protein sequence | MKLYNLKDHN EQVSFAQAVT QGLGKQQGLF FPHELPEFSL TEIDEMLNQD FVSRSAKILS AFIGDEIPQQ ILEERVRAAF AFPAPVAQVE SDVGCLELFH GPTLAFKDFG GRFMAQMLTH ISGDKPVTIL TATSGDTGAA VAHAFYGLEN VRVVILYPRG KISPLQEKLF CTLGGNIETV AIDGDFDACQ ALVKQAFDDE ELKTALGLNS ANSINISRLL AQICYYFEAV AQLPQGARNQ LVISVPSGNF GDLTAGLLAK SLGLPVKRFI AATNVNDTVP RFLHDGKWAP KATQATLSNA MDVSQPNNWP RVEELFRRKI WRLTELGYAA VDDTTTQQTM RELKAKGYIS EPHAAVAYRA LRDQLNPGEY GLFLGTAHPA KFKESVESIL GETLALPEAL AERADLPLLS HHLPADFAAL RKLMMTRQ
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