Gene Smal_4041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_4041 
SymboltrmE 
ID6474935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4567399 
End bp4568748 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content69% 
IMG OID642733254 
ProducttRNA modification GTPase TrmE 
Protein accessionYP_002030423 
Protein GI194367813 
COG category[R] General function prediction only 
COG ID[COG0486] Predicted GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.934487 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGACG CGATCCGCAC CGACACCATC GTGGCCATCG CCAGCGCACC CGGCGCGGGT 
GGCGTCGGTC TGCTGCGCCT GTCCGGTCCG CGCGCTGCGG CCATCGCCAA CGCATTGGGT
GCGCCTGCGC TGCGCCCGCG CCATGCGCAT TACGCACGCC TGCGCGATGC CGACGGCGAG
GTCATTGATG ATGGCATCGT GCTGTGGTTC CCGGCGCCGA ACAGCTTCAC CGGCGAAGAA
GTGGTGGAAC TGCAGGGCCA TGGCAGCCCG GTGCTGCTGC AGCAACTGGT CGCGCGCTGC
ATCGCGCTCG GTGCGCGTCA GGCGCGCCCG GGTGAGTTCA GCGAACGCGC GTTCCTCAAC
GGCAAGCTCG ACCTGGCCCA GGCTGAGGCC ATCGCCGACC TGATCGCCGC GGGTGACAAC
CGCGCCGCAC GCGCTGCACG CCGTTCGCTG GACGGCGTGT TCTCCCGCCG CATCGACGCG
GTGGTCGAGC AGTTGGTGCT GCTGCGCATC CACGTGGAAG CGGCCATCGA CTTCGCCGAC
GAACCGCTGG ATACGCTTGG TGGGGCGCAG GTACGGCGTG GGCTGAAGCA GGCGCGCAGT
GACCTGGCCC TGCTGCGCCG CGATGCCGAA CGCGGCCGTC GCCTGCGCGA TGGCCTGCAT
GCAGTGCTGA TCGGGCCGCC CAATGCGGGC AAGAGTTCAT TGCTCAATGC CCTGGCCGGC
AGCGAGCGCG CCATCGTCAC CGACATTGCC GGCACCACCC GCGACACCCT GCGCGAGACC
ATCCGCCTGG ATGGCCTGGA ACTGACCCTG GTCGATACCG CCGGCCTGCG CGACGGCGGC
GATGCCATCG AACGCGAAGG CATGCGCCGC GCCCATGTGG AGATCGAGCG CACCGACCTG
GCGTTGATCG TGCTGGATGC GCGCGATCCG GCTGCGGGTG AAGCGGCGCT GGGCGATGCC
GTGGCGGCGG TTCCGCACAA GGTCTACATC CACAACAAGT CAGACCTGCT GACGGCGCTG
CCGGCACTGG ACGATCCGGA TCGCGTGTTC GTTTCCGCCG CCACCGGCGC CGGACTCGAA
GATCTGCACG CGCGCCTGCG TTCGATTGCC TCGGCCGGGG CGGGCGAGCA GGTGGACGGC
GAGTTCTCCG CGCGCACGCG GCATGTGGAT GCAATCGAGC GTGCGCAGGA ACACGCGCAG
CGCGCCGATG GCGAGCTGGC CCACGAACAC CTGGAGCTGG CCGCCGAAGA ACTGCGGCTG
GCCCACGACG CGCTGGGCGA GATCACCGGG CAGATGAGTG CCGATGACCT GCTGGGAAGG
ATCTTCTCCA GTTTCTGCAT TGGGAAGTAG
 
Protein sequence
MNDAIRTDTI VAIASAPGAG GVGLLRLSGP RAAAIANALG APALRPRHAH YARLRDADGE 
VIDDGIVLWF PAPNSFTGEE VVELQGHGSP VLLQQLVARC IALGARQARP GEFSERAFLN
GKLDLAQAEA IADLIAAGDN RAARAARRSL DGVFSRRIDA VVEQLVLLRI HVEAAIDFAD
EPLDTLGGAQ VRRGLKQARS DLALLRRDAE RGRRLRDGLH AVLIGPPNAG KSSLLNALAG
SERAIVTDIA GTTRDTLRET IRLDGLELTL VDTAGLRDGG DAIEREGMRR AHVEIERTDL
ALIVLDARDP AAGEAALGDA VAAVPHKVYI HNKSDLLTAL PALDDPDRVF VSAATGAGLE
DLHARLRSIA SAGAGEQVDG EFSARTRHVD AIERAQEHAQ RADGELAHEH LELAAEELRL
AHDALGEITG QMSADDLLGR IFSSFCIGK