Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_4041 |
Symbol | trmE |
ID | 6474935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 4567399 |
End bp | 4568748 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642733254 |
Product | tRNA modification GTPase TrmE |
Protein accession | YP_002030423 |
Protein GI | 194367813 |
COG category | [R] General function prediction only |
COG ID | [COG0486] Predicted GTPase |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.934487 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGACG CGATCCGCAC CGACACCATC GTGGCCATCG CCAGCGCACC CGGCGCGGGT GGCGTCGGTC TGCTGCGCCT GTCCGGTCCG CGCGCTGCGG CCATCGCCAA CGCATTGGGT GCGCCTGCGC TGCGCCCGCG CCATGCGCAT TACGCACGCC TGCGCGATGC CGACGGCGAG GTCATTGATG ATGGCATCGT GCTGTGGTTC CCGGCGCCGA ACAGCTTCAC CGGCGAAGAA GTGGTGGAAC TGCAGGGCCA TGGCAGCCCG GTGCTGCTGC AGCAACTGGT CGCGCGCTGC ATCGCGCTCG GTGCGCGTCA GGCGCGCCCG GGTGAGTTCA GCGAACGCGC GTTCCTCAAC GGCAAGCTCG ACCTGGCCCA GGCTGAGGCC ATCGCCGACC TGATCGCCGC GGGTGACAAC CGCGCCGCAC GCGCTGCACG CCGTTCGCTG GACGGCGTGT TCTCCCGCCG CATCGACGCG GTGGTCGAGC AGTTGGTGCT GCTGCGCATC CACGTGGAAG CGGCCATCGA CTTCGCCGAC GAACCGCTGG ATACGCTTGG TGGGGCGCAG GTACGGCGTG GGCTGAAGCA GGCGCGCAGT GACCTGGCCC TGCTGCGCCG CGATGCCGAA CGCGGCCGTC GCCTGCGCGA TGGCCTGCAT GCAGTGCTGA TCGGGCCGCC CAATGCGGGC AAGAGTTCAT TGCTCAATGC CCTGGCCGGC AGCGAGCGCG CCATCGTCAC CGACATTGCC GGCACCACCC GCGACACCCT GCGCGAGACC ATCCGCCTGG ATGGCCTGGA ACTGACCCTG GTCGATACCG CCGGCCTGCG CGACGGCGGC GATGCCATCG AACGCGAAGG CATGCGCCGC GCCCATGTGG AGATCGAGCG CACCGACCTG GCGTTGATCG TGCTGGATGC GCGCGATCCG GCTGCGGGTG AAGCGGCGCT GGGCGATGCC GTGGCGGCGG TTCCGCACAA GGTCTACATC CACAACAAGT CAGACCTGCT GACGGCGCTG CCGGCACTGG ACGATCCGGA TCGCGTGTTC GTTTCCGCCG CCACCGGCGC CGGACTCGAA GATCTGCACG CGCGCCTGCG TTCGATTGCC TCGGCCGGGG CGGGCGAGCA GGTGGACGGC GAGTTCTCCG CGCGCACGCG GCATGTGGAT GCAATCGAGC GTGCGCAGGA ACACGCGCAG CGCGCCGATG GCGAGCTGGC CCACGAACAC CTGGAGCTGG CCGCCGAAGA ACTGCGGCTG GCCCACGACG CGCTGGGCGA GATCACCGGG CAGATGAGTG CCGATGACCT GCTGGGAAGG ATCTTCTCCA GTTTCTGCAT TGGGAAGTAG
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Protein sequence | MNDAIRTDTI VAIASAPGAG GVGLLRLSGP RAAAIANALG APALRPRHAH YARLRDADGE VIDDGIVLWF PAPNSFTGEE VVELQGHGSP VLLQQLVARC IALGARQARP GEFSERAFLN GKLDLAQAEA IADLIAAGDN RAARAARRSL DGVFSRRIDA VVEQLVLLRI HVEAAIDFAD EPLDTLGGAQ VRRGLKQARS DLALLRRDAE RGRRLRDGLH AVLIGPPNAG KSSLLNALAG SERAIVTDIA GTTRDTLRET IRLDGLELTL VDTAGLRDGG DAIEREGMRR AHVEIERTDL ALIVLDARDP AAGEAALGDA VAAVPHKVYI HNKSDLLTAL PALDDPDRVF VSAATGAGLE DLHARLRSIA SAGAGEQVDG EFSARTRHVD AIERAQEHAQ RADGELAHEH LELAAEELRL AHDALGEITG QMSADDLLGR IFSSFCIGK
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