Gene Smal_4028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_4028 
Symbol 
ID6474922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4554353 
End bp4554982 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content68% 
IMG OID642733241 
ProductLysine exporter protein (LYSE/YGGA) 
Protein accessionYP_002030410 
Protein GI194367800 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.180103 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTGGA TGGGCATCCA GGACCTGTGG ACGTTTCTGG TCGCCGTGCT GGTGTTTCTC 
GCCCTGCCCG GCCCCGGCAC CTTCACCCTG CTGACCGCCA CCGGCCGTGG CGGCGTGCGT
GGCGGCTACA CCGCGCTGGC CGGCCTGCTG GTCGGTGACC AGATCCTGAT GTGGCTTGCG
CTGGCCGGCG TGGCCGCGCT GCTCAAGGCC AACCCACTGG TGTTCCACGC GGTGCAGTAC
CTCGGCGCGG CCTACCTGGT GTGGGTGGGC ATCAGCCTGC TGCGCACGCC CAAGCATGAG
GGCGGTGACG CCGGCCCGAT CCGCATGCAG CCGGGTCGCT ACTTCCAGCA GGCGATCCTG
GTCAGCCTGC TCAACCCGAA GGCGATCCTT TTTTACATGG CCTTCCTGCC GTTGTTCATC
GATCCGAAGG CGCACCAGGG CATTGCTACC TTTGCGGCGC TGGCCGGCAT CATCCTGGTG
GTCAGCATCG CCTACTGCTC GATGTTGATC GGGGTCGGCA ATCTGGCCCG CCGCCGGCTG
ATCCAGCACC CGCGGATCAG CGATGCGCTG CGCCGCGTGG CCGGCCTGTT CCTGGTGGGG
TTCGGCATCC GGCTGGGGCT GAACGGATGA
 
Protein sequence
MPWMGIQDLW TFLVAVLVFL ALPGPGTFTL LTATGRGGVR GGYTALAGLL VGDQILMWLA 
LAGVAALLKA NPLVFHAVQY LGAAYLVWVG ISLLRTPKHE GGDAGPIRMQ PGRYFQQAIL
VSLLNPKAIL FYMAFLPLFI DPKAHQGIAT FAALAGIILV VSIAYCSMLI GVGNLARRRL
IQHPRISDAL RRVAGLFLVG FGIRLGLNG