Gene Smal_4016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_4016 
Symbol 
ID6474910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4544659 
End bp4545456 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content70% 
IMG OID642733229 
ProductABC transporter related 
Protein accessionYP_002030398 
Protein GI194367788 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.304399 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.276484 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCCCA TGTCGGCTTC CGCCTCCAGT CTGGTGCAGT TATCCAACGT CCGCATCGAC 
CGGAGCGGGC GCACGATCCT GCGCGACGTG TCGCTGCAGG TGCCCAAGGG CAGCATCACG
GCGGTGCTCG GTCCGTCGGG CAGTGGCAAG TCGACCCTGC TGGCGGCGCT GACCGGCGAA
CTGCGCCCGG TCGCCGGCGA GGTCACCCTG TTCGGCAAGC CGATTCCGCA CGACAGCGGC
GCGCTGCTGG AAATGCGCAA GAGCGTGGGC GTGCTGCTGC AGGGCAATGG CCTGCTGACC
GACCTCACCG TGGCCGAGAA CGTGGCGCTG CCGCTGCGCA CCCACACCCG CCTGCCCACT
GCGGTACTGC GCCGGCTGGT GCAGATGAAA CTGCATGCGG TGGGCCTGCT GGCCGCCGCC
GATGCCTGGC CGCGCGAGCT GTCAGGTGGC ATGGCGCGCC GCGTGGCGCT GGCCCGTGCA
CTGGCGCTGG ACCCGCCGCT GATGATCTAC GACGAGCCGC TGACCGGGCT GGACCCGATC
GCCTCGGGGG TGATCATGAG CCTGATCCAG CGCCTCAACC ACAGCCTGGG CCTGACCAGC
ATCATCGTCA GCCACCACGT GCACGAGACC CTGCCGATCT GCGACCAGGT GATCGCGATC
GCCAATGGCG GCATCGTGTT CCAGGGCACG CCCGAGGCAC TGCAGTCCAG CCAGGACCCG
CTGCTGCGGC AGTTCCTGCA CGGCCAGCCC GATGGCCCCA TCCCGTTCGA TGCCGCGCCG
CGCGCGAGGG TCGCCTGA
 
Protein sequence
MVPMSASASS LVQLSNVRID RSGRTILRDV SLQVPKGSIT AVLGPSGSGK STLLAALTGE 
LRPVAGEVTL FGKPIPHDSG ALLEMRKSVG VLLQGNGLLT DLTVAENVAL PLRTHTRLPT
AVLRRLVQMK LHAVGLLAAA DAWPRELSGG MARRVALARA LALDPPLMIY DEPLTGLDPI
ASGVIMSLIQ RLNHSLGLTS IIVSHHVHET LPICDQVIAI ANGGIVFQGT PEALQSSQDP
LLRQFLHGQP DGPIPFDAAP RARVA