Gene Smal_4015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_4015 
Symbol 
ID6474909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4541130 
End bp4544474 
Gene Length3345 bp 
Protein Length1114 aa 
Translation table11 
GC content70% 
IMG OID642733228 
Productexodeoxyribonuclease V, gamma subunit 
Protein accessionYP_002030397 
Protein GI194367787 
COG category[L] Replication, recombination and repair 
COG ID[COG1330] Exonuclease V gamma subunit 
TIGRFAM ID[TIGR01450] exodeoxyribonuclease V, gamma subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.186712 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.268037 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGACC CGGGCAGCGA TTTCCGCCTC TACCATTCCA ACTCCCTGGA CGTGCTGGCC 
GCGCTGCTGG CACGCAACGT GCGTGCGCCG GTACCTGGCC AGCCGCTGCT GGCGCCGGAG
GTGGTGCTGA TCCCGCAGGT GGCGATGCGG CGCTGGCTGC AAGCGACACT GGCCGCGGAA
TTCGGCGTTG CCGCCAACCT CGAATTCCTC ACCCCGGGCG AATTCGTGGC CCGCGCGCTG
AAGGCCAACA TCAGCGGCGA GCAGGACGAC CTGGATGCAG CCGGCCTGCA CTGGAAGCTG
TACCAGGCAC TGCGTGACCC GGCACTGCTG GCGCAGCCAC CGATGCGCGC GCTGCAGTCC
TATCTTGCCG GTGGCGACGC GTTGAAGCCG TGGGCGCTGG CCGGCGAGCT GGCCTCGGTG
TTCGAGAAGT ACCAGGCCTG GCGCCGTGAC TGGCTGCTGC GCTGGGCCGC CGGTGCCGAT
CCGGCCGACC CGCAGGCGAT CCTGTGGCGC ACCATCACCC ACGGCCACGA CTATCGCGCG
CGCCGCATCC AGGAATACCT GGACCGCTTC GAGGGCGCCG GTAAGCCGTT GCCGCAGGGC
TTGCCGCTGC GCATGTCCGC GTTCGCGACG CTCAACATCT CGCCCGATGT GCTGCGGGTG
ATGGCCACCC AGGCACGGGT CGGCGAGCTG CACTTCTATA TGCCCACCCC GGTGCAGTCG
TACTGGGGCG ATCTGCAGAC CCTGGCCGAG CGGCTGCGCA GCGGCGCGCC TGATCCCTTC
GGTGAAGCGG CCGGCGAGAA CCGCCTGCTG GAAGCCTGGG GCGCGGCGGG CCGCGACTTC
ATGGCGGTGC TGGGCAGCTA CGAGGTGGTG CACCCGGCCG GCGAGATTGC GGCCTATTCC
GATCCGGAGG AGGACACCCG GCCGACCCTG GACGAAGGCG GCCTGTCCGA CAGCCTGCTG
CATCGCCTGC AACGCGATCT GTTCCACCGC CGCGCGCTGC CCTCGGGTGA GCTGCGCGAC
GGCCTGCGCA GCGACGACCC CAGCCTGCAG GTGCACGCCT GCCACACCCG CCTGCGCGAA
CTGCAGGTGC TGCACGACCA GCTGCGCAGC CTGCTGCAGG ACCCGCGCTT CGACCCGCCG
CTGCAGGCGC GCGAGATCGC GGTGCTGGCG CCGGACATCG ATCCCTACGT GCCGTACCTG
GAAGCGGTGT TCGGCGGCCG TGGTGGCGAG GAGGAGCACA TCCCCTATGC GCTGGCCGAC
AGCAGCCCGC TGGCCGGTGA ACCGCTGGCC GATGTGTTCG TGCACCTGCT GGGCCTGCCG
GTATCGCGAT TCGGGCTCAA TGAAGTGCTG GACCTGCTGG CCAGTGCACC GCTGGCCGAA
GCGGCCGGGC TGGAAGCGGT GGACTTCGAC CGCTTGCACG GCTGGCTGCA GCAGGCCGGT
GCACGCTGGG GCCTGGATGC GAAGCACCGC CACCAGCACC AGGCGCCGGC CGACGACGCC
TACACCTGGC AGTTCGCACT GGACCGCCTG GTGCTCGGTC ACGCCACCGG CAGCGAGGCC
GACCTGGCCG GTGTCGCGCC GTGGATCGAA CTGGAAGGTG GTGCACTGGA CGCGCTGGAC
CGGCTGCTGC GCCTGTTGCG CGTGCTGGCG GTCTATCAGC GTCGCCTCGG TGAGCTGCTG
ACCCCGGCGC AGTGGCGGCA GCGCCTGCTG TCGCTGCTCG ATGCGCTGCT GCCGACCGCG
CCGAGTTCGC CCAACAGCCA GCGCGCGCTG GAGCGCCTGC GCAAGCTGCT GAACCAGTTT
GCCGACGATG CCGCCAAGGC CGGTTTCGAA GACGGCGTGC CGCCGGAGGT GGTGCGTTCG
CATTTTGCCG GTGCACTGTC CGAGGCCGAT ACGCGCGCAC CGCTGCTGAC CGGTGGCATC
AGTTTCGGCC GCATGGTGCC GATGCGCCTG CTGCCATTCC GGGTGATCTG CGTGCTGGGC
CTCAATGATG GCGATTTCCC GCGCCGTGAC CCGGCGGCCG GTCTCAACCA GCTCACCGCC
GAACTGGACA CGCCGCGCCG CCGACCGGGC GACCGCTCCA CCCGCGAGGA CGACCGTTTC
CTGTTCCTGC AGCTGTTCGC CGCCGCGCAG GAGGTGTTCT ATCTCAGCTA TCTCGGCGCC
GATCCGCGCG ATGGCAGCGT GCGCGAGCCG TCGGTGCTGG TCAGTGAACT GATCGATGCC
GCCGCTGCGT ATCACCTCGA TCCGCCTGCG GCGGTCCGCG ACTTCACCGT GCGCCATGCC
TTGCAGCCGT TCTCGCCCGC CGCATTCGGT GATGGCGACC CGCGTCGCTT CAGCTATCGC
CGCCAGTGGC ATCCGGCTGC CGGCCGCCTC ACCGGCCAGC GCGGCGGCCT GCAGCCGTGG
TTCGACGCAC CGTTGCCGCC GCCGCTCGAC GATGCAGTGG AAGACGAGGT CGCGCTCGAT
ACCCTGCGCC GTTTCCTGTG CGACCCGGCC GGGCAGTTCC TCGCGCAGTC GCTGGGCCTG
CGCCTGGCCG ACGATGTCGA GGAGGTCGAT GACCTGGAAC CGCTGGTGCT GTCATCGCGC
GGCCCGGAAA AGCGCAGCGT GCAGGCGGCC GTGGTGCGCG CCACGCTCAG CGGCGATTCC
GAGCCGCTGT ATCCGCGACT GCGCGCGCGT GGACTGCTGC CGTCGGGTCC ATTGGGCGAG
CGCCAGTTCG AGGTGGAGCA GTTGAAGACG CGCCCGTATG CCAGTGCGCT GCTGGGCTGG
ATGCAGGGCG AACCGCTGGA AAGCCGTCGC TACGAAGTGG ACATCGACGG CGTGCGCCTG
CACGGCCGCG TGGCTGATCG GCATCCCGAA GGGCTGGTGC GCCTGCGGGC CGGCACGCTC
AATGGCAATG CAGTGATCCG CCAGGGCCTG GACTGGCTGC TGGCCAACGC CGCCGGCGAT
GCGTTGCCGC TGGTGCAGTT CCACGATGGC GGTGACGCCG GTCCCGGCCC GCATGTGCTG
CCAGCACTGA GCGCCCCCGC TGCACGCGCC GCGCTGCGTG CGCTGCTGCA ATTGCGCCAG
CGCGGCCTGC GTGAGCCGCT GCGCTTTGCC CCGTATACCG GCTGGGTGCT GTACAACGCA
CCGGCAGAAA AACAGCGCAG CGAAGGCTGG AAGCAGTGGC ATGGCAGCGA CCGCAGTTGG
GGCGAATCCA GCAGCGACGC CTGGCAGCTG CTGCTGCGCG GTGCCGACCC GTTCGCCACC
GATGCCAGCT ATGCCGAGCT GCTGCGCAAC AGCCAGGTGG TCTTCAGCGC GGTGCGCGAA
GGCCGCACTC TCGGCACCGA AGCACGCCAG GAGGGCAACG CATGA
 
Protein sequence
MSDPGSDFRL YHSNSLDVLA ALLARNVRAP VPGQPLLAPE VVLIPQVAMR RWLQATLAAE 
FGVAANLEFL TPGEFVARAL KANISGEQDD LDAAGLHWKL YQALRDPALL AQPPMRALQS
YLAGGDALKP WALAGELASV FEKYQAWRRD WLLRWAAGAD PADPQAILWR TITHGHDYRA
RRIQEYLDRF EGAGKPLPQG LPLRMSAFAT LNISPDVLRV MATQARVGEL HFYMPTPVQS
YWGDLQTLAE RLRSGAPDPF GEAAGENRLL EAWGAAGRDF MAVLGSYEVV HPAGEIAAYS
DPEEDTRPTL DEGGLSDSLL HRLQRDLFHR RALPSGELRD GLRSDDPSLQ VHACHTRLRE
LQVLHDQLRS LLQDPRFDPP LQAREIAVLA PDIDPYVPYL EAVFGGRGGE EEHIPYALAD
SSPLAGEPLA DVFVHLLGLP VSRFGLNEVL DLLASAPLAE AAGLEAVDFD RLHGWLQQAG
ARWGLDAKHR HQHQAPADDA YTWQFALDRL VLGHATGSEA DLAGVAPWIE LEGGALDALD
RLLRLLRVLA VYQRRLGELL TPAQWRQRLL SLLDALLPTA PSSPNSQRAL ERLRKLLNQF
ADDAAKAGFE DGVPPEVVRS HFAGALSEAD TRAPLLTGGI SFGRMVPMRL LPFRVICVLG
LNDGDFPRRD PAAGLNQLTA ELDTPRRRPG DRSTREDDRF LFLQLFAAAQ EVFYLSYLGA
DPRDGSVREP SVLVSELIDA AAAYHLDPPA AVRDFTVRHA LQPFSPAAFG DGDPRRFSYR
RQWHPAAGRL TGQRGGLQPW FDAPLPPPLD DAVEDEVALD TLRRFLCDPA GQFLAQSLGL
RLADDVEEVD DLEPLVLSSR GPEKRSVQAA VVRATLSGDS EPLYPRLRAR GLLPSGPLGE
RQFEVEQLKT RPYASALLGW MQGEPLESRR YEVDIDGVRL HGRVADRHPE GLVRLRAGTL
NGNAVIRQGL DWLLANAAGD ALPLVQFHDG GDAGPGPHVL PALSAPAARA ALRALLQLRQ
RGLREPLRFA PYTGWVLYNA PAEKQRSEGW KQWHGSDRSW GESSSDAWQL LLRGADPFAT
DASYAELLRN SQVVFSAVRE GRTLGTEARQ EGNA