Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_4015 |
Symbol | |
ID | 6474909 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 4541130 |
End bp | 4544474 |
Gene Length | 3345 bp |
Protein Length | 1114 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642733228 |
Product | exodeoxyribonuclease V, gamma subunit |
Protein accession | YP_002030397 |
Protein GI | 194367787 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1330] Exonuclease V gamma subunit |
TIGRFAM ID | [TIGR01450] exodeoxyribonuclease V, gamma subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.186712 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.268037 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTGACC CGGGCAGCGA TTTCCGCCTC TACCATTCCA ACTCCCTGGA CGTGCTGGCC GCGCTGCTGG CACGCAACGT GCGTGCGCCG GTACCTGGCC AGCCGCTGCT GGCGCCGGAG GTGGTGCTGA TCCCGCAGGT GGCGATGCGG CGCTGGCTGC AAGCGACACT GGCCGCGGAA TTCGGCGTTG CCGCCAACCT CGAATTCCTC ACCCCGGGCG AATTCGTGGC CCGCGCGCTG AAGGCCAACA TCAGCGGCGA GCAGGACGAC CTGGATGCAG CCGGCCTGCA CTGGAAGCTG TACCAGGCAC TGCGTGACCC GGCACTGCTG GCGCAGCCAC CGATGCGCGC GCTGCAGTCC TATCTTGCCG GTGGCGACGC GTTGAAGCCG TGGGCGCTGG CCGGCGAGCT GGCCTCGGTG TTCGAGAAGT ACCAGGCCTG GCGCCGTGAC TGGCTGCTGC GCTGGGCCGC CGGTGCCGAT CCGGCCGACC CGCAGGCGAT CCTGTGGCGC ACCATCACCC ACGGCCACGA CTATCGCGCG CGCCGCATCC AGGAATACCT GGACCGCTTC GAGGGCGCCG GTAAGCCGTT GCCGCAGGGC TTGCCGCTGC GCATGTCCGC GTTCGCGACG CTCAACATCT CGCCCGATGT GCTGCGGGTG ATGGCCACCC AGGCACGGGT CGGCGAGCTG CACTTCTATA TGCCCACCCC GGTGCAGTCG TACTGGGGCG ATCTGCAGAC CCTGGCCGAG CGGCTGCGCA GCGGCGCGCC TGATCCCTTC GGTGAAGCGG CCGGCGAGAA CCGCCTGCTG GAAGCCTGGG GCGCGGCGGG CCGCGACTTC ATGGCGGTGC TGGGCAGCTA CGAGGTGGTG CACCCGGCCG GCGAGATTGC GGCCTATTCC GATCCGGAGG AGGACACCCG GCCGACCCTG GACGAAGGCG GCCTGTCCGA CAGCCTGCTG CATCGCCTGC AACGCGATCT GTTCCACCGC CGCGCGCTGC CCTCGGGTGA GCTGCGCGAC GGCCTGCGCA GCGACGACCC CAGCCTGCAG GTGCACGCCT GCCACACCCG CCTGCGCGAA CTGCAGGTGC TGCACGACCA GCTGCGCAGC CTGCTGCAGG ACCCGCGCTT CGACCCGCCG CTGCAGGCGC GCGAGATCGC GGTGCTGGCG CCGGACATCG ATCCCTACGT GCCGTACCTG GAAGCGGTGT TCGGCGGCCG TGGTGGCGAG GAGGAGCACA TCCCCTATGC GCTGGCCGAC AGCAGCCCGC TGGCCGGTGA ACCGCTGGCC GATGTGTTCG TGCACCTGCT GGGCCTGCCG GTATCGCGAT TCGGGCTCAA TGAAGTGCTG GACCTGCTGG CCAGTGCACC GCTGGCCGAA GCGGCCGGGC TGGAAGCGGT GGACTTCGAC CGCTTGCACG GCTGGCTGCA GCAGGCCGGT GCACGCTGGG GCCTGGATGC GAAGCACCGC CACCAGCACC AGGCGCCGGC CGACGACGCC TACACCTGGC AGTTCGCACT GGACCGCCTG GTGCTCGGTC ACGCCACCGG CAGCGAGGCC GACCTGGCCG GTGTCGCGCC GTGGATCGAA CTGGAAGGTG GTGCACTGGA CGCGCTGGAC CGGCTGCTGC GCCTGTTGCG CGTGCTGGCG GTCTATCAGC GTCGCCTCGG TGAGCTGCTG ACCCCGGCGC AGTGGCGGCA GCGCCTGCTG TCGCTGCTCG ATGCGCTGCT GCCGACCGCG CCGAGTTCGC CCAACAGCCA GCGCGCGCTG GAGCGCCTGC GCAAGCTGCT GAACCAGTTT GCCGACGATG CCGCCAAGGC CGGTTTCGAA GACGGCGTGC CGCCGGAGGT GGTGCGTTCG CATTTTGCCG GTGCACTGTC CGAGGCCGAT ACGCGCGCAC CGCTGCTGAC CGGTGGCATC AGTTTCGGCC GCATGGTGCC GATGCGCCTG CTGCCATTCC GGGTGATCTG CGTGCTGGGC CTCAATGATG GCGATTTCCC GCGCCGTGAC CCGGCGGCCG GTCTCAACCA GCTCACCGCC GAACTGGACA CGCCGCGCCG CCGACCGGGC GACCGCTCCA CCCGCGAGGA CGACCGTTTC CTGTTCCTGC AGCTGTTCGC CGCCGCGCAG GAGGTGTTCT ATCTCAGCTA TCTCGGCGCC GATCCGCGCG ATGGCAGCGT GCGCGAGCCG TCGGTGCTGG TCAGTGAACT GATCGATGCC GCCGCTGCGT ATCACCTCGA TCCGCCTGCG GCGGTCCGCG ACTTCACCGT GCGCCATGCC TTGCAGCCGT TCTCGCCCGC CGCATTCGGT GATGGCGACC CGCGTCGCTT CAGCTATCGC CGCCAGTGGC ATCCGGCTGC CGGCCGCCTC ACCGGCCAGC GCGGCGGCCT GCAGCCGTGG TTCGACGCAC CGTTGCCGCC GCCGCTCGAC GATGCAGTGG AAGACGAGGT CGCGCTCGAT ACCCTGCGCC GTTTCCTGTG CGACCCGGCC GGGCAGTTCC TCGCGCAGTC GCTGGGCCTG CGCCTGGCCG ACGATGTCGA GGAGGTCGAT GACCTGGAAC CGCTGGTGCT GTCATCGCGC GGCCCGGAAA AGCGCAGCGT GCAGGCGGCC GTGGTGCGCG CCACGCTCAG CGGCGATTCC GAGCCGCTGT ATCCGCGACT GCGCGCGCGT GGACTGCTGC CGTCGGGTCC ATTGGGCGAG CGCCAGTTCG AGGTGGAGCA GTTGAAGACG CGCCCGTATG CCAGTGCGCT GCTGGGCTGG ATGCAGGGCG AACCGCTGGA AAGCCGTCGC TACGAAGTGG ACATCGACGG CGTGCGCCTG CACGGCCGCG TGGCTGATCG GCATCCCGAA GGGCTGGTGC GCCTGCGGGC CGGCACGCTC AATGGCAATG CAGTGATCCG CCAGGGCCTG GACTGGCTGC TGGCCAACGC CGCCGGCGAT GCGTTGCCGC TGGTGCAGTT CCACGATGGC GGTGACGCCG GTCCCGGCCC GCATGTGCTG CCAGCACTGA GCGCCCCCGC TGCACGCGCC GCGCTGCGTG CGCTGCTGCA ATTGCGCCAG CGCGGCCTGC GTGAGCCGCT GCGCTTTGCC CCGTATACCG GCTGGGTGCT GTACAACGCA CCGGCAGAAA AACAGCGCAG CGAAGGCTGG AAGCAGTGGC ATGGCAGCGA CCGCAGTTGG GGCGAATCCA GCAGCGACGC CTGGCAGCTG CTGCTGCGCG GTGCCGACCC GTTCGCCACC GATGCCAGCT ATGCCGAGCT GCTGCGCAAC AGCCAGGTGG TCTTCAGCGC GGTGCGCGAA GGCCGCACTC TCGGCACCGA AGCACGCCAG GAGGGCAACG CATGA
|
Protein sequence | MSDPGSDFRL YHSNSLDVLA ALLARNVRAP VPGQPLLAPE VVLIPQVAMR RWLQATLAAE FGVAANLEFL TPGEFVARAL KANISGEQDD LDAAGLHWKL YQALRDPALL AQPPMRALQS YLAGGDALKP WALAGELASV FEKYQAWRRD WLLRWAAGAD PADPQAILWR TITHGHDYRA RRIQEYLDRF EGAGKPLPQG LPLRMSAFAT LNISPDVLRV MATQARVGEL HFYMPTPVQS YWGDLQTLAE RLRSGAPDPF GEAAGENRLL EAWGAAGRDF MAVLGSYEVV HPAGEIAAYS DPEEDTRPTL DEGGLSDSLL HRLQRDLFHR RALPSGELRD GLRSDDPSLQ VHACHTRLRE LQVLHDQLRS LLQDPRFDPP LQAREIAVLA PDIDPYVPYL EAVFGGRGGE EEHIPYALAD SSPLAGEPLA DVFVHLLGLP VSRFGLNEVL DLLASAPLAE AAGLEAVDFD RLHGWLQQAG ARWGLDAKHR HQHQAPADDA YTWQFALDRL VLGHATGSEA DLAGVAPWIE LEGGALDALD RLLRLLRVLA VYQRRLGELL TPAQWRQRLL SLLDALLPTA PSSPNSQRAL ERLRKLLNQF ADDAAKAGFE DGVPPEVVRS HFAGALSEAD TRAPLLTGGI SFGRMVPMRL LPFRVICVLG LNDGDFPRRD PAAGLNQLTA ELDTPRRRPG DRSTREDDRF LFLQLFAAAQ EVFYLSYLGA DPRDGSVREP SVLVSELIDA AAAYHLDPPA AVRDFTVRHA LQPFSPAAFG DGDPRRFSYR RQWHPAAGRL TGQRGGLQPW FDAPLPPPLD DAVEDEVALD TLRRFLCDPA GQFLAQSLGL RLADDVEEVD DLEPLVLSSR GPEKRSVQAA VVRATLSGDS EPLYPRLRAR GLLPSGPLGE RQFEVEQLKT RPYASALLGW MQGEPLESRR YEVDIDGVRL HGRVADRHPE GLVRLRAGTL NGNAVIRQGL DWLLANAAGD ALPLVQFHDG GDAGPGPHVL PALSAPAARA ALRALLQLRQ RGLREPLRFA PYTGWVLYNA PAEKQRSEGW KQWHGSDRSW GESSSDAWQL LLRGADPFAT DASYAELLRN SQVVFSAVRE GRTLGTEARQ EGNA
|
| |