| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_4010 |
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| Symbol | |
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| ID | 6474904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | + |
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| Start bp | 4531533 |
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| End bp | 4532993 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 642733223 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_002030392 |
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| Protein GI | 194367782 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.940434 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.118266 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACGCCG CCCTGCCCCG TCTCGGCCTG ATCGTCGCGC TGGCCAGCCT GGCCGCGTGC
AGGACCGTCG GCCCCGACTA CGCATTGCCG GAAGGTTCGG CGTTCAAGCG TCCGCAGGCC
AATGCCGCCT TCATCGATAC GCAGAACCCG CAGATTGCCG CCAACCAGGC GCTGCCCGAC
CGCTGGTGGT CGCTGTACAA CGACCCGGTG CTGGATCGCC TGATCACCCA GGCGCTGCGT
GACAACGTGG AACTGAAGGC CGCCGATGCG CACCTGCGCC GTGCCGCGGC GGTGTACGAA
CAGGCACTGG ATGCCGGTGG CTTCGAGTAT GAAGCCGAAG CCGGTGCCAG CCGCGCGCAG
CTGTCGGCCG AATCGTTCCT GCAGGAGCAC GAGCTGCCGG TGATCAACCT GGCCGATGGC
AAGTTCGCGG TCAGTTACCA GTTCGATCTG TTCGGCAAGC TCAAGCGCGG CGCCGAAGCG
GCCCGTGCCG ACGACCAGTC GGTCGCTGCG GCACGCGATC TGGCCCAGGT CAGCGTGGTC
GCGCAGGTGG CCGACAGCTA TCTGGAAATC TGCCACGCCA ACCACGAACT GCACGTGGCC
GAGCATTCCC TGCAGCTGCA GCAGCGCAGC CGCAGCGTTA CCGAGCGCCT GATCGCGGCC
GGCCGCGGCA CGCCGCCGGA ACTGGCCCGC GCCAATGCCC AGGTGGCGCT GCTGGAAGCT
GCACTCCCGC CGCTGCAGGC GCAGCGCTCG GCCGCCGCCT ATTCGCTGGC CGCCCTGCTT
GGACAGACCC CGGGCCAGCT GCCGGCCGGT GTAATCGACT GTGCACATGC CCCCAGCCTG
GCGCAGCCGC TGCCGGTCGG TGATGGCCGT GCACTGCTGC AGCGTCGCCC GGACGTGCGC
CAGGCCGAGC GCAAGCTGGC CTCGGCCACC GCGCGGATTG GCGTGGCCAC CGCCGAGCTG
TATCCGGACA TCCGCCTGGG GGCCTCGCTC GGTGCCGCTG GCCTGCTCGA GGACTTCGGC
ACGCCGATGA CCCAGCAGTG GTCGATCGGC CCGCTGATCT CGTGGACGCT GCCGTCGTCC
GGCACGCACG CACGCATCCA CGCCGCCGAA GCCGGTGCCG ATGCGGCCCT GGCCGAGTTC
GACCACACCG TGCTGCAGGC GCTGCGCGAG ACCCAGACCG CGCTGGACCG CTATGCGCAG
GACCTGCGCC GCCTGCAGTC GCTGCGCATC GCGCAGGAGC AGGCCGCACT GGCCGCCGAG
CAGAACCGCC GGCTGTACCA GGGCGGCCGC ACGCCGTACC TGTCCAGCCT GGATGCCGAC
CGCAGCCTGG CCACCAGCGA TGCCACCCTG GCGGCCGCCG AAGCGCAGGT CTCGCGCGAC
CAGATCCACC TCTTCCTGGT GCTGGGTGGC GGTTGGCAGG CCAGCGCCGC CGCGCCCAAC
GCCTCGACCG CAGCGAAGTA A
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| Protein sequence | MNAALPRLGL IVALASLAAC RTVGPDYALP EGSAFKRPQA NAAFIDTQNP QIAANQALPD
RWWSLYNDPV LDRLITQALR DNVELKAADA HLRRAAAVYE QALDAGGFEY EAEAGASRAQ
LSAESFLQEH ELPVINLADG KFAVSYQFDL FGKLKRGAEA ARADDQSVAA ARDLAQVSVV
AQVADSYLEI CHANHELHVA EHSLQLQQRS RSVTERLIAA GRGTPPELAR ANAQVALLEA
ALPPLQAQRS AAAYSLAALL GQTPGQLPAG VIDCAHAPSL AQPLPVGDGR ALLQRRPDVR
QAERKLASAT ARIGVATAEL YPDIRLGASL GAAGLLEDFG TPMTQQWSIG PLISWTLPSS
GTHARIHAAE AGADAALAEF DHTVLQALRE TQTALDRYAQ DLRRLQSLRI AQEQAALAAE
QNRRLYQGGR TPYLSSLDAD RSLATSDATL AAAEAQVSRD QIHLFLVLGG GWQASAAAPN
ASTAAK
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