Gene Smal_3990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3990 
Symbol 
ID6474874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4496456 
End bp4497355 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content68% 
IMG OID642733193 
Productprotein of unknown function DUF500 
Protein accessionYP_002030372 
Protein GI194367762 
COG category[S] Function unknown 
COG ID[COG2930] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.571133 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCGCC CGATCCAAGC CCTGCTGATC GCCGCCACTC TGCTGTCCAG CCAGGCCATG 
GCCGGACCGC AGGAAGACCA GCGCGCCCGC AATGCGGTAC GTGTGCTGGC CGAAATCCAG
GGAATTCCTG AACAGGGTAT TCCTGACAAA TTGCTGGACG AAGGCCGCGC CGTCATCGTC
ATTCCCGACA CGATCAAGGC CGGTCTGGTC ATTGGTGGTC GCCGTGGGCA TGGCCTGATG
TCGGTACGCA TGCCCAACGG CGCCTGGTCC AACCCGGTGT TCATCAAGCT TACCGGTGGC
AGCATCGGCT TCCAGGCCGG TGTGCAGTCC TCCGACGTGG TGCTGGTGTT CCGCAACGAC
CGCAGCCTGG ACAATCTGGT CAACGGCAAG TTCACCCTTG GCGCCGATGC CGGTGTCGCG
GCGGGCCCGG TTGGCCGCAA TGCCGCTGCT GCGACCGACG GCCAGCTGAA GGCCGAGATC
TGGTCGTGGT CCCGCGCCCG GGGCCTGTTC GCCGGTGTTG CTCTTGATGG TGCGGTGCTG
CAGATCGACG ATGCCGCCAA CCTCGACGCC TACGGCAGCA ACACCACACC GCGGATGATC
TTCGAAGGCC GTGCGGCGGG TTCGCCGTCG ATGGATGTGG TCGCCTTCCG CGACCGCCTG
GAAGAGGCCA CCTACGCCGC TCGCAACAAC CGCAACGGCA ACGGCAATGG CGGCAACGCC
CCGCGCCCGG CAGCCGCCCC GGCTGCCGCG CCGGCGCCTG TTCAGGCAGC GCCGGCCGCG
CCGGCCGAAG CCACCACCGC GCCGCTGCAG AACGTGCCGC AGACCCCGCC GCCGCAGCAG
CAGGGCTTCC AGCCGGTCAC CGACGGTGAA ATCCGCACGG AAACGCTGGG CGGAAACTGA
 
Protein sequence
MRRPIQALLI AATLLSSQAM AGPQEDQRAR NAVRVLAEIQ GIPEQGIPDK LLDEGRAVIV 
IPDTIKAGLV IGGRRGHGLM SVRMPNGAWS NPVFIKLTGG SIGFQAGVQS SDVVLVFRND
RSLDNLVNGK FTLGADAGVA AGPVGRNAAA ATDGQLKAEI WSWSRARGLF AGVALDGAVL
QIDDAANLDA YGSNTTPRMI FEGRAAGSPS MDVVAFRDRL EEATYAARNN RNGNGNGGNA
PRPAAAPAAA PAPVQAAPAA PAEATTAPLQ NVPQTPPPQQ QGFQPVTDGE IRTETLGGN