Gene Smal_3988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3988 
Symbol 
ID6474872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4495640 
End bp4496137 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content66% 
IMG OID642733191 
Producttwin-arginine translocation protein, TatB subunit 
Protein accessionYP_002030370 
Protein GI194367760 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1826] Sec-independent protein secretion pathway components 
TIGRFAM ID[TIGR01410] twin arginine-targeting protein translocase TatB 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.900518 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTTGATA TCGGCTTCAG CGAACTGCTG GTGATTGCGG TGGTTGCCCT GGTGGTGCTC 
GGTCCTGAGC GCCTGCCCAA GGCGGCCCGC TTTGCCGGCC TGTGGGTACG TCGTGCCCGC
AATCAGTGGG ATTCGGTGAA ACAGGAACTG GAGCGCGAAC TGCAGGCCGA GGACATCAAG
CGGCAGATGC AGGACGTGCG CCAGGGCATG CAGGACACCG AGAACCAGTT GCGTGCCAGC
GGTGAAGCAA TCCGCCGCGA AGCGCAGCAG GCGCAGCAGC AGGGCGATGA CCTTGTGCAG
GAGGTGCGTA CACCCGCACA GGCGGATCTG CCGCCACACC TGAGCCAGCC GTCCGAGACC
GATGCGCCGG CACAGGACAG CGGACCGGTT TCGACCACGG CTGCTACGGA AGGCGTTGTT
TCTTCAGGGG CCGTTCCTGC CACGTCCGCT GAAGCCGGCC CGACGCCGCC GACGCAGAGC
ACGGAGCGTC ATCCATGA
 
Protein sequence
MFDIGFSELL VIAVVALVVL GPERLPKAAR FAGLWVRRAR NQWDSVKQEL ERELQAEDIK 
RQMQDVRQGM QDTENQLRAS GEAIRREAQQ AQQQGDDLVQ EVRTPAQADL PPHLSQPSET
DAPAQDSGPV STTAATEGVV SSGAVPATSA EAGPTPPTQS TERHP