Gene Smal_3979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3979 
Symbol 
ID6474863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4479945 
End bp4482092 
Gene Length2148 bp 
Protein Length715 aa 
Translation table11 
GC content68% 
IMG OID642733182 
Producthypothetical protein 
Protein accessionYP_002030361 
Protein GI194367751 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.137716 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.400863 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATCAC GCAAAGCCCT TCCTACCGCC CTGGCCCTGG GCCTGACCCT CGCCGCCGGC 
GCCCACGCCG ATGAAGGCAT GTGGATGCCG ACCCAGCTGC CGGAACTGGC CAAGCCGCTG
CAGGCCGCAG GTTTCAAGGG CAATCCGGCC GACCTGGCCA ACGTCACTGC GCCGCCACTG
AGCGCGGTGG TGCGTGCCGG TGGTGGCACC GGCTCGTTCG TATCCGCCGA CGGCCTGCTG
CTGACCAACC ACCACGTGGC GATGGGCGTG ATCCAGTACA ACAGCTCGCC CGAGCACGAC
CTGATCAATG GTGGCTTCAT CGCCAAGGGC CGCGCCGACG AGCGTCCGGC CAACCCGGAC
TTCCGCGTGC TGGTCACCGT CGGCTTCGAC AAGGTGACCG ACCAGGTGCT GGCGCAGGCG
CGTGGCAAGA CCGGCCGCGC CTACTTCGAT GCCGTCGATG CGGCCAGCAA GCAGATCGTG
GCCGAGTGCG AGAAGGACGG CAGCGTGCGC TGCTCGGTGG CCAACATGTA CTACGGCACC
GACTTCTACC GCATCGCCCA GCTGGAACTG AGCGACGTGC GATTGGTCTA TGCGCCGCCC
CGTGCGATCG GCAACTACGG CGATGAGATC GACAACTTCA TGTGGCCGCG CCACACCGGC
GACTTCACCC TTCTGCGCGC CTACGTTGGC AAGGACGGCA AGCCGGCCGC CTACAGCAAG
GACAACGTGC CCTACCAGGC GCCGGCGCAC CTGCAGATGT CGGTGGAAGG TCCGAAGGAA
GGTGACTACG CGATGCTGGC CGGTTACCCG GGCATCACCT ATCGCCACCG TACCGCGGCC
GAATTCGCCG GCCAGATCGA TACCGTGCTG CCGCGCCGCG TGTCGGTGTT CCAGCAGATG
ATCGACACCA TCGAGGCCGC CAGCGCCAAG GACGCGCAGG CGCGCACCCG CTACGCCTCG
CAGCTGCAGT CGCTGAAGAA CAACCGCAAG CGCGCCGCCG GTGAGCTGGA AGGCCTGTTG
CGCAGCGACG CCAAGGCCCA GCGTGCCGCC GACGAGACGG CGATGCTGGC TGCCACCGAC
CGCAAGTACC AGGGCGACAT CAAGGCGTTG CTGACCAACT TGTCGCAGGG CGCGGCGGTG
GGCGAACGTG ACCTGTTGCT GGACCAGATG GCCGCACAGA GCCAGCTGCT GCGCTCGGCG
CTGCTGCTGG AACGCCTGCG CATCGAGTCG GCCAAGCCGG ACGCGCAGCG CGAGAGCGGT
TTCCAGCAGC GCGACCAGGC GATGATCGAA GGCGTGCTCA AGCAGGTTCA GCGCCGTTAC
GCGCCGGAGG TCGAGAAGGC GCTGCTGACC ACCCTGCTGA CCCGCTACCA GCAGCTGCCG
GACGCGCAGC GCGTGGCCGA GTTCGATACG GCCTTCGGCC GTACCCCGGA GCAGCTGGCC
AAGGCACTGG ACACCCTGTA CGCCGGCACC CAGCTGGGTG ACGAGGCGCA GCGCCTGTCG
CGCTTCGCTG CTGCACGCGA AGGCAAGGCA CTGGCCGCCG ATCCGCTGAT CGCCGTGGCC
GGCCCGCTGG TGGCCGCGCA GCTGCGCATC GAGAACGAAA GCAAGACCCG CGAAGGCGAG
CAGCTGCGCC TGCGCCCGGC CTACATGCAG GCGCTGTTCG CCTGGCGTGC CAAGCAGGGC
CGCGCGGTGT ACCCGGATGC CAACCGCACC CTGCGCATCA GCTACGGCAA GGTCGAGGCG
CTGCATCCGC GCGACGGCGT GACCTACTCG CCGGTGACCA CCGTGGCCGG CATCGTCGAG
AAGAACACCA ACGCCTATCC GTTCGATGCG CCCAAGCCGC TGCTGGCCGC GATCGCCAAG
GGTGACTTCG GCAGCACCGC CGACCCGGCG CTGAAGACCC AGACGGTCAA CTTCCTGACC
AACCTGGATA CCACCGGCGG CAACTCCGGC TCGCCGGTGC TCAACGCCAA GGGCGAACTG
ATCGGCCTGA ACTTCGACAG CAACTGGGAA TCGGTCAGCG CCAGCTGGTG GTTCGACCCG
CGCTACAAGC GCGCCGTGCA CGTGGACATG CGCTACCTGC GCTGGCTGCT GGCCAAGGTC
TACCCGGCGC CGGAACTGCT GAAGGAAATG GGCGTGCCGG CCCAGTAA
 
Protein sequence
MSSRKALPTA LALGLTLAAG AHADEGMWMP TQLPELAKPL QAAGFKGNPA DLANVTAPPL 
SAVVRAGGGT GSFVSADGLL LTNHHVAMGV IQYNSSPEHD LINGGFIAKG RADERPANPD
FRVLVTVGFD KVTDQVLAQA RGKTGRAYFD AVDAASKQIV AECEKDGSVR CSVANMYYGT
DFYRIAQLEL SDVRLVYAPP RAIGNYGDEI DNFMWPRHTG DFTLLRAYVG KDGKPAAYSK
DNVPYQAPAH LQMSVEGPKE GDYAMLAGYP GITYRHRTAA EFAGQIDTVL PRRVSVFQQM
IDTIEAASAK DAQARTRYAS QLQSLKNNRK RAAGELEGLL RSDAKAQRAA DETAMLAATD
RKYQGDIKAL LTNLSQGAAV GERDLLLDQM AAQSQLLRSA LLLERLRIES AKPDAQRESG
FQQRDQAMIE GVLKQVQRRY APEVEKALLT TLLTRYQQLP DAQRVAEFDT AFGRTPEQLA
KALDTLYAGT QLGDEAQRLS RFAAAREGKA LAADPLIAVA GPLVAAQLRI ENESKTREGE
QLRLRPAYMQ ALFAWRAKQG RAVYPDANRT LRISYGKVEA LHPRDGVTYS PVTTVAGIVE
KNTNAYPFDA PKPLLAAIAK GDFGSTADPA LKTQTVNFLT NLDTTGGNSG SPVLNAKGEL
IGLNFDSNWE SVSASWWFDP RYKRAVHVDM RYLRWLLAKV YPAPELLKEM GVPAQ