Gene Smal_3962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3962 
Symbol 
ID6474846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4459776 
End bp4460498 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content66% 
IMG OID642733165 
Productglycosyl transferase family 2 
Protein accessionYP_002030344 
Protein GI194367734 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAAC CCGAGCTTTC CGTCGTCGTC CCCGTGTTCA ACGAGCGCGA CAACGTCGCG 
CCACTGGTGG CCGAAATCAC CGCTGCTCTG CGTGGCCGCT TGCCGTTCGA GATCGTCTAC
ATCGATGACC ACTCGCGCGA TGACACCCTG GCAGTGCTGC AGGGCCTGAA GGCCACCACC
CCGGAACTGC GGGTGCTGCA CCACGTGAAC CAGAGTGGGC AGAGCACGGC GGTGCGCACC
GGCGTCAAGC ACGCCCTGGC GCCGTGGATC GCGACTCTCG ATGGTGACGG GCAGAACGAT
CCTGCCGACA TTCCCAAGCT GCTGGCTGCA CGTGATGCCG CAGCGGCGCA GGTGAAGCTG
TTCGCCGGCT GGCGCGTCAA CCGCCAGGAC AGCGGCAGCA AGCGCTGGGC CAGCAAGTGG
GCCAATGCCA TCCGCGCACG CATGCTGCGC GATGACACCC CCGACACCGG CTGTGGTATC
AAGCTGTTCG AGCGCAGCGC GTTCCTCGAC CTGCCGTATT TCGACCACAT GCACCGCTAC
CTGCCAGCGC TGATGCAGCG TGCCGGCTGG AAGACCACCA GCGTGCCGGT CAACCATCGC
CACCGTACCG CCGGCGTTTC CAAGTACAAC AACCTGGGCC GTGCGCTGGT CGGCATCCGT
GACCTGCGCG GCGTGGCGTG GCTGATCACC CGCAGCAAGC GCACCGCGGT GGAAGAGCGA
TGA
 
Protein sequence
MSQPELSVVV PVFNERDNVA PLVAEITAAL RGRLPFEIVY IDDHSRDDTL AVLQGLKATT 
PELRVLHHVN QSGQSTAVRT GVKHALAPWI ATLDGDGQND PADIPKLLAA RDAAAAQVKL
FAGWRVNRQD SGSKRWASKW ANAIRARMLR DDTPDTGCGI KLFERSAFLD LPYFDHMHRY
LPALMQRAGW KTTSVPVNHR HRTAGVSKYN NLGRALVGIR DLRGVAWLIT RSKRTAVEER