Gene Smal_3938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3938 
Symbol 
ID6474822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4432783 
End bp4433679 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content68% 
IMG OID642733141 
Productcoproporphyrinogen III oxidase 
Protein accessionYP_002030320 
Protein GI194367710 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0408] Coproporphyrinogen III oxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.537037 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAAT TCGAGCGCGT GCGCGCCTAC CTCACCGACC TGCAGGACCG CATCTGTGCG 
GCGATCGAGG CCGCCGATGG CCAGGCCCGC TTCCAGGAAG ACCTGTGGCA GCGTGCCGAG
GGCGGTGGCG GGCGCACCCG CGTGCTGCGC GACGGTGCGG TGTTCGAACA GGCCGGCATC
GGCTTCTCCG ACGTGGCCGG CAGCCGCCTG CCGCCCTCGG CCTCGGCCAA CCGTCCGGAA
CTGGCTGGCG CCTCCTGGCG CGCCACCGGC GTGTCGCTGG TGTTTCACCC GCTGAACCCC
TACGTGCCGA CCACCCATGC CAACGTGCGC TTCTTCCAGG CGCAGCGCGA CGGCGAGGTG
GTGGCCAGCT GGTTCGGCGG CGGCTTCGAC CTGACCCCGT TCTATCCGTT CGACGAGGAC
GTGCAGCACT GGCACCGGGT TGCGCGCGAC CTGTGCGCAC CGTTCGGCGA TGAGCGCTAC
GCTGCGCACA AGCGCTGGTG CGACGAGTAT TTCTTCCTGC GCCATCGCAA CGAGACACGC
GGTGTCGGCG GCCTGTTCTT CGACGACCTG CACGGCGACT TCGAGCGTGA TTTCGATTAT
CTGCGTGCGG TCGGCGATGG CTTCCTTGAT GCGTACCTGC CGATCGTGCA GCAGCGCAAG
GACACCGCCT ACGGCGAGCG CGAGCGAGAG TTCCAGCTGT ACCGACGCGG CCGCTATGTG
GAATTCAACC TGGTCTACGA CCGCGGCACG CTGTTTGGCC TGCAGAGTGG TGGCCGCAGC
GAAAGCATCC TGATGAGCCT GCCGCCGCGG GTGCGTTGGG AGTACGGCTT CAACCCGGAA
GCGGGCAGCG CCGAGGCACG CCTGGCCGAT TACCTGGTGC CGCGCGACTG GCTCTGA
 
Protein sequence
MNEFERVRAY LTDLQDRICA AIEAADGQAR FQEDLWQRAE GGGGRTRVLR DGAVFEQAGI 
GFSDVAGSRL PPSASANRPE LAGASWRATG VSLVFHPLNP YVPTTHANVR FFQAQRDGEV
VASWFGGGFD LTPFYPFDED VQHWHRVARD LCAPFGDERY AAHKRWCDEY FFLRHRNETR
GVGGLFFDDL HGDFERDFDY LRAVGDGFLD AYLPIVQQRK DTAYGERERE FQLYRRGRYV
EFNLVYDRGT LFGLQSGGRS ESILMSLPPR VRWEYGFNPE AGSAEARLAD YLVPRDWL