Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_3938 |
Symbol | |
ID | 6474822 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 4432783 |
End bp | 4433679 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642733141 |
Product | coproporphyrinogen III oxidase |
Protein accession | YP_002030320 |
Protein GI | 194367710 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0408] Coproporphyrinogen III oxidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.537037 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGAAT TCGAGCGCGT GCGCGCCTAC CTCACCGACC TGCAGGACCG CATCTGTGCG GCGATCGAGG CCGCCGATGG CCAGGCCCGC TTCCAGGAAG ACCTGTGGCA GCGTGCCGAG GGCGGTGGCG GGCGCACCCG CGTGCTGCGC GACGGTGCGG TGTTCGAACA GGCCGGCATC GGCTTCTCCG ACGTGGCCGG CAGCCGCCTG CCGCCCTCGG CCTCGGCCAA CCGTCCGGAA CTGGCTGGCG CCTCCTGGCG CGCCACCGGC GTGTCGCTGG TGTTTCACCC GCTGAACCCC TACGTGCCGA CCACCCATGC CAACGTGCGC TTCTTCCAGG CGCAGCGCGA CGGCGAGGTG GTGGCCAGCT GGTTCGGCGG CGGCTTCGAC CTGACCCCGT TCTATCCGTT CGACGAGGAC GTGCAGCACT GGCACCGGGT TGCGCGCGAC CTGTGCGCAC CGTTCGGCGA TGAGCGCTAC GCTGCGCACA AGCGCTGGTG CGACGAGTAT TTCTTCCTGC GCCATCGCAA CGAGACACGC GGTGTCGGCG GCCTGTTCTT CGACGACCTG CACGGCGACT TCGAGCGTGA TTTCGATTAT CTGCGTGCGG TCGGCGATGG CTTCCTTGAT GCGTACCTGC CGATCGTGCA GCAGCGCAAG GACACCGCCT ACGGCGAGCG CGAGCGAGAG TTCCAGCTGT ACCGACGCGG CCGCTATGTG GAATTCAACC TGGTCTACGA CCGCGGCACG CTGTTTGGCC TGCAGAGTGG TGGCCGCAGC GAAAGCATCC TGATGAGCCT GCCGCCGCGG GTGCGTTGGG AGTACGGCTT CAACCCGGAA GCGGGCAGCG CCGAGGCACG CCTGGCCGAT TACCTGGTGC CGCGCGACTG GCTCTGA
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Protein sequence | MNEFERVRAY LTDLQDRICA AIEAADGQAR FQEDLWQRAE GGGGRTRVLR DGAVFEQAGI GFSDVAGSRL PPSASANRPE LAGASWRATG VSLVFHPLNP YVPTTHANVR FFQAQRDGEV VASWFGGGFD LTPFYPFDED VQHWHRVARD LCAPFGDERY AAHKRWCDEY FFLRHRNETR GVGGLFFDDL HGDFERDFDY LRAVGDGFLD AYLPIVQQRK DTAYGERERE FQLYRRGRYV EFNLVYDRGT LFGLQSGGRS ESILMSLPPR VRWEYGFNPE AGSAEARLAD YLVPRDWL
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