Gene Smal_3926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3926 
Symbol 
ID6474810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4419782 
End bp4420795 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content68% 
IMG OID642733129 
Productcytochrome d ubiquinol oxidase, subunit II 
Protein accessionYP_002030308 
Protein GI194367698 
COG category[C] Energy production and conversion 
COG ID[COG1294] Cytochrome bd-type quinol oxidase, subunit 2 
TIGRFAM ID[TIGR00203] cytochrome d oxidase, subunit II (cydB) 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCTGA TGACCTGGCT GCCGGTGGCG TGGTTCGCGG TGATCGGCTT CGGCGTGCTG 
ATGTACGTGG TGCTGGACGG CTTCGTGCTC GGCATCGGCA TCCTTGCCCC GTTCGCCGAG
GACGAGGAAC AGCTGGACCT GATGATGAAC ACCGCCGCGC CGATCTGGGA CGGCAACGAG
ACCTGGCTGG TGCTCGGTGG CGCCGGCCTG CTGGCGGCGT TCCCAAAGGC GTATGCGGTG
CTGCTGTCGG CGCTGTACCT GCCGGTGCTG CTGCTGGTGG TGGCGCTGGT GTTCCGCGGT
GTGGCCTTCG AGTTCCGCTT CAAGGCGCAT CGATCGCGCC GGCTGTGGAG CGTGGCGTTC
GGCCTCGGTT CGTTGTTGGC CACGTTTGCC CAGGGCGTGA TCCTCGGCAC CCTGGTGCAG
GGCATCCCGC TGGTGGACGG TGTCTATCAG GGCGGGCCGT TTGCCTGGTT CAGCCCGTTC
GCGATGCTGA CCGGTGCCGC GCTGGTGGCC GGCTATGCGC TGCTGGGCAG CACCTGGCTG
ATCCTGAAGA CCGAGGGGCG CGTGCAGGCG CTGGCGCGGC AGATGACCCG GCCACTGGTG
GTGGCGGTGA TCGCGGCGAT GGGCCTTGTG AGCAGCTGGC TGCCGTTCCT CGATTCGCGG
TTGATGGATC GCTGGTTCAG CGACGGCAAC TTCTGGTGGC TGTCACCGGT GCCGCTGCTG
ACCCTGGTGG TGGCCGCCGC GCTGTGGCGC AGTGCCACTC ACCCGCGCCG TGACCTGCCG
CCGTTCCTGC TCAGCCTGGC CCTGTTCGTG CTCGGCTTCC TCGGCCTGGT ACTGGGCATG
TGGCCTTATC TGCTGCCACC GTCGATGACC CTGTGGCAGG CCGCCGCGCC GGCGTCGTCG
CTGGGCTTCA CGCTGGTCGG GCTGGTCATA TTGCTGCCGG TCATCCTCGG CTATACGGCG
TGGTCCTACC GGGTATTCCG CGGCAAGGTG CACGCCGACA CCGGTTACCA CTGA
 
Protein sequence
MDLMTWLPVA WFAVIGFGVL MYVVLDGFVL GIGILAPFAE DEEQLDLMMN TAAPIWDGNE 
TWLVLGGAGL LAAFPKAYAV LLSALYLPVL LLVVALVFRG VAFEFRFKAH RSRRLWSVAF
GLGSLLATFA QGVILGTLVQ GIPLVDGVYQ GGPFAWFSPF AMLTGAALVA GYALLGSTWL
ILKTEGRVQA LARQMTRPLV VAVIAAMGLV SSWLPFLDSR LMDRWFSDGN FWWLSPVPLL
TLVVAAALWR SATHPRRDLP PFLLSLALFV LGFLGLVLGM WPYLLPPSMT LWQAAAPASS
LGFTLVGLVI LLPVILGYTA WSYRVFRGKV HADTGYH