Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_3914 |
Symbol | |
ID | 6474798 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 4408626 |
End bp | 4410980 |
Gene Length | 2355 bp |
Protein Length | 784 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642733117 |
Product | putative lipoprotein transmembrane |
Protein accession | YP_002030296 |
Protein GI | 194367686 |
COG category | [R] General function prediction only |
COG ID | [COG4258] Predicted exporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.856836 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGTGAGG CCGCGGCATC GAACGCACCG GACCGGTTGC GACGCTGGTG GCACTGGCTG GGCATCGCCT GGCTGCTGGT GCTGGTGGTA CTGGGCGCGC AGCAGTGGCA CCTGTGGAGC CAGCAATCGC GGATCGACAC CGACATCCTC GCCCTGCTGC CGCAGGATGC ACACGACCGC CTGTTGAGCG ATGTCACCCG GCGCATCGCC GACGGCAGCT CGCGGCAGGT GGTCGTGCTG CTGGGCAGCA AGGACGGTGC TGTCGCCAAG CGTGCGCAGG CGGCTTTTGC CGCAGCCATG GCCAAGGACG CCGATCACGC CCTGCTGGTA CCCAGCGGCT CGATCGAAGG CTGGTTCGAT GAGGCGCGCG CGTTCTACGC GCCGTACCGT GACCGCCTGC TGACACCTGC ACAGCGCGAG CAGCTGCAGG GCAGCGAGCC GGGCGCGTTG GCCGAACAGG CGTTGGCCGC GCTGTACGGC CCGATGGGCG CGCCGCGCCT GACCGACTGG CGGCAGGACC CGTTGTCGCT GTGGCCGCAG TGGTGGCAGC AGCAGGCGCA GGGTTCGGGA CTGCGGCTGG GCGATGACGG CCTGCTCGAA GCCGAGGACA AGCATTGGGC CGCGCTGCAG TTCGACACGC CGGGTTCGGC GTTCCAGCTC GACGGCGAAC GCCATCTCGA TGGCCTGCTG GAACGTGCCG GGCAGGCAGC AAAAGCGGCC GCTCCGGATC TGGAGATCCT GCATGCCGGC GTGCCACTGC ACGCCGAAGC GGCCGCGGTG CAGGCCAACC AGGAGATCAA CACCATCGGT TGGGGGTCGC TGGCGGCGGT GCTGCTGCTG GTGTGGCTGG CATTCCGCTC GCTGCGGCCG ATCCTGCTGG TGGCCGCCTC GCTGCTGATC GGCTGTGGTG TGGCGCTGGC GGTGACCGTG CTGGTGTTTG GCAAGGTGCA CGTGCTGACT CTGGTATTTG GTGCGTCGCT GGTGGGCGTG GCCGAGGACT ACGGCATTCA CTGGTTCGCC TCGCGCCAGG CCGAGCCGGC CGATCGTCGC TGGAAACTGC TGCGGCATCT GCTGCCTGGC CTGTGGCTGG CCCTGCTGAC CAGTGCGCTG GCCTACCTGG CATTGGGCCT GGCCCCGTTC CCGGGCCTGC GCCAGATGGC GCTGTTCTCG GTGGTCGGCC TGGCTGCCGC CTTCCTCACG GTGATCTTCT GGTTCCCGTG GCTGGATGGT GGCGAGATCC GCCAGACCCG CTTCTCGCAG TGGCTGGGCA ACACGCTGGA GCGTTTCCCG CGCCTGCATG GCCGCCGCGC GGTGACGATG TTCGTGGTGA TCACGCTGGC ACTGTCTGCC ATCGGCATCG CGCGCCTGCA GAGCAACGAC GACCTGCGCA GCCTGCAGTC GTCGCCGCCG GCATTGATGG CGCAGCAGAT CCGCCTGAGC CAGTTGCTGG GCATGCCCAG CCCGGCGCAG TTCTACCTGG TGCAGGGTGC CGATGCCGCG CAGCTGCTGC AGCGCGAAGA AGCGCTGACC GAACGCCTGC GTGTATTGGC CAACGACAAG CGCATTGGTG GCTATCGCGC GATCAGCGAT TGGCTGCCGT CGCCGTCGCG CCAGCAGGCC GATGCCGCGC TGACCGCGAG GGTGGAACCC AGCGTGCTGT CGGCCGTGTC CGAGGCCGTG GGCGAGCCGC TGCAGCGACC GCAGTTCGCG GCCGCACCAC TCAGCGCCGA AGCCTTCCTG GCCTCGCCGG CGTCGCAGCC GTTCCGCCAC CTGTGGGTGG GCGAGGTCGG TGGGCAGATG ATCAGCGTGG TGATGGTCGA TGACCTGTCG CGCGCCGATG CGCTGGCCAC CCTGCAGGGC GCGGCCGAAG GCCTGCCGGG TGTGCGCTGG GTGGACCGTA CTGCCGACTT CTCCACGCTG CTGGGCCACT ACCGCAAGCT GATGGGTGGG CTGCTGCTGG TCGGCATCGC GCTGGTGTTC GGCGCGCTGT GGCTGCGCTA CCGCGGCCAG GCCTGGCGCG TGTTCGCGCC GACCCTGATT GCCGGTGCCT TGACCCTGGG CCTGCTGGGT CTGTTCGGCC AGCCGCTGCA GCTGTTCAAC GTGCTGGCAC TGATGCTGCT GCTGGGCATG GGCATCGACT ACGGCATCTT CCTGATCGAG CACCGTGGCG ATGCCAGCGC CTGGCTGGCA GTGTGCGTGG GCGCGGCCAG CACCTGGCTG TCGTTCGGCC TGCTGGGCCT GTCGCAGACC CCGGCGCTGC GCGCGTTCGG CCTGACGCTG CTGTTCGGCA TCGGCCTGGT CTGGCTGATC TCGCCGCTGT TCCGGCCGCC GCCACATGAC CTGCCGCCAG CTTGA
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Protein sequence | MSEAAASNAP DRLRRWWHWL GIAWLLVLVV LGAQQWHLWS QQSRIDTDIL ALLPQDAHDR LLSDVTRRIA DGSSRQVVVL LGSKDGAVAK RAQAAFAAAM AKDADHALLV PSGSIEGWFD EARAFYAPYR DRLLTPAQRE QLQGSEPGAL AEQALAALYG PMGAPRLTDW RQDPLSLWPQ WWQQQAQGSG LRLGDDGLLE AEDKHWAALQ FDTPGSAFQL DGERHLDGLL ERAGQAAKAA APDLEILHAG VPLHAEAAAV QANQEINTIG WGSLAAVLLL VWLAFRSLRP ILLVAASLLI GCGVALAVTV LVFGKVHVLT LVFGASLVGV AEDYGIHWFA SRQAEPADRR WKLLRHLLPG LWLALLTSAL AYLALGLAPF PGLRQMALFS VVGLAAAFLT VIFWFPWLDG GEIRQTRFSQ WLGNTLERFP RLHGRRAVTM FVVITLALSA IGIARLQSND DLRSLQSSPP ALMAQQIRLS QLLGMPSPAQ FYLVQGADAA QLLQREEALT ERLRVLANDK RIGGYRAISD WLPSPSRQQA DAALTARVEP SVLSAVSEAV GEPLQRPQFA AAPLSAEAFL ASPASQPFRH LWVGEVGGQM ISVVMVDDLS RADALATLQG AAEGLPGVRW VDRTADFSTL LGHYRKLMGG LLLVGIALVF GALWLRYRGQ AWRVFAPTLI AGALTLGLLG LFGQPLQLFN VLALMLLLGM GIDYGIFLIE HRGDASAWLA VCVGAASTWL SFGLLGLSQT PALRAFGLTL LFGIGLVWLI SPLFRPPPHD LPPA
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