Gene Smal_3914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3914 
Symbol 
ID6474798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4408626 
End bp4410980 
Gene Length2355 bp 
Protein Length784 aa 
Translation table11 
GC content69% 
IMG OID642733117 
Productputative lipoprotein transmembrane 
Protein accessionYP_002030296 
Protein GI194367686 
COG category[R] General function prediction only 
COG ID[COG4258] Predicted exporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.856836 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGTGAGG CCGCGGCATC GAACGCACCG GACCGGTTGC GACGCTGGTG GCACTGGCTG 
GGCATCGCCT GGCTGCTGGT GCTGGTGGTA CTGGGCGCGC AGCAGTGGCA CCTGTGGAGC
CAGCAATCGC GGATCGACAC CGACATCCTC GCCCTGCTGC CGCAGGATGC ACACGACCGC
CTGTTGAGCG ATGTCACCCG GCGCATCGCC GACGGCAGCT CGCGGCAGGT GGTCGTGCTG
CTGGGCAGCA AGGACGGTGC TGTCGCCAAG CGTGCGCAGG CGGCTTTTGC CGCAGCCATG
GCCAAGGACG CCGATCACGC CCTGCTGGTA CCCAGCGGCT CGATCGAAGG CTGGTTCGAT
GAGGCGCGCG CGTTCTACGC GCCGTACCGT GACCGCCTGC TGACACCTGC ACAGCGCGAG
CAGCTGCAGG GCAGCGAGCC GGGCGCGTTG GCCGAACAGG CGTTGGCCGC GCTGTACGGC
CCGATGGGCG CGCCGCGCCT GACCGACTGG CGGCAGGACC CGTTGTCGCT GTGGCCGCAG
TGGTGGCAGC AGCAGGCGCA GGGTTCGGGA CTGCGGCTGG GCGATGACGG CCTGCTCGAA
GCCGAGGACA AGCATTGGGC CGCGCTGCAG TTCGACACGC CGGGTTCGGC GTTCCAGCTC
GACGGCGAAC GCCATCTCGA TGGCCTGCTG GAACGTGCCG GGCAGGCAGC AAAAGCGGCC
GCTCCGGATC TGGAGATCCT GCATGCCGGC GTGCCACTGC ACGCCGAAGC GGCCGCGGTG
CAGGCCAACC AGGAGATCAA CACCATCGGT TGGGGGTCGC TGGCGGCGGT GCTGCTGCTG
GTGTGGCTGG CATTCCGCTC GCTGCGGCCG ATCCTGCTGG TGGCCGCCTC GCTGCTGATC
GGCTGTGGTG TGGCGCTGGC GGTGACCGTG CTGGTGTTTG GCAAGGTGCA CGTGCTGACT
CTGGTATTTG GTGCGTCGCT GGTGGGCGTG GCCGAGGACT ACGGCATTCA CTGGTTCGCC
TCGCGCCAGG CCGAGCCGGC CGATCGTCGC TGGAAACTGC TGCGGCATCT GCTGCCTGGC
CTGTGGCTGG CCCTGCTGAC CAGTGCGCTG GCCTACCTGG CATTGGGCCT GGCCCCGTTC
CCGGGCCTGC GCCAGATGGC GCTGTTCTCG GTGGTCGGCC TGGCTGCCGC CTTCCTCACG
GTGATCTTCT GGTTCCCGTG GCTGGATGGT GGCGAGATCC GCCAGACCCG CTTCTCGCAG
TGGCTGGGCA ACACGCTGGA GCGTTTCCCG CGCCTGCATG GCCGCCGCGC GGTGACGATG
TTCGTGGTGA TCACGCTGGC ACTGTCTGCC ATCGGCATCG CGCGCCTGCA GAGCAACGAC
GACCTGCGCA GCCTGCAGTC GTCGCCGCCG GCATTGATGG CGCAGCAGAT CCGCCTGAGC
CAGTTGCTGG GCATGCCCAG CCCGGCGCAG TTCTACCTGG TGCAGGGTGC CGATGCCGCG
CAGCTGCTGC AGCGCGAAGA AGCGCTGACC GAACGCCTGC GTGTATTGGC CAACGACAAG
CGCATTGGTG GCTATCGCGC GATCAGCGAT TGGCTGCCGT CGCCGTCGCG CCAGCAGGCC
GATGCCGCGC TGACCGCGAG GGTGGAACCC AGCGTGCTGT CGGCCGTGTC CGAGGCCGTG
GGCGAGCCGC TGCAGCGACC GCAGTTCGCG GCCGCACCAC TCAGCGCCGA AGCCTTCCTG
GCCTCGCCGG CGTCGCAGCC GTTCCGCCAC CTGTGGGTGG GCGAGGTCGG TGGGCAGATG
ATCAGCGTGG TGATGGTCGA TGACCTGTCG CGCGCCGATG CGCTGGCCAC CCTGCAGGGC
GCGGCCGAAG GCCTGCCGGG TGTGCGCTGG GTGGACCGTA CTGCCGACTT CTCCACGCTG
CTGGGCCACT ACCGCAAGCT GATGGGTGGG CTGCTGCTGG TCGGCATCGC GCTGGTGTTC
GGCGCGCTGT GGCTGCGCTA CCGCGGCCAG GCCTGGCGCG TGTTCGCGCC GACCCTGATT
GCCGGTGCCT TGACCCTGGG CCTGCTGGGT CTGTTCGGCC AGCCGCTGCA GCTGTTCAAC
GTGCTGGCAC TGATGCTGCT GCTGGGCATG GGCATCGACT ACGGCATCTT CCTGATCGAG
CACCGTGGCG ATGCCAGCGC CTGGCTGGCA GTGTGCGTGG GCGCGGCCAG CACCTGGCTG
TCGTTCGGCC TGCTGGGCCT GTCGCAGACC CCGGCGCTGC GCGCGTTCGG CCTGACGCTG
CTGTTCGGCA TCGGCCTGGT CTGGCTGATC TCGCCGCTGT TCCGGCCGCC GCCACATGAC
CTGCCGCCAG CTTGA
 
Protein sequence
MSEAAASNAP DRLRRWWHWL GIAWLLVLVV LGAQQWHLWS QQSRIDTDIL ALLPQDAHDR 
LLSDVTRRIA DGSSRQVVVL LGSKDGAVAK RAQAAFAAAM AKDADHALLV PSGSIEGWFD
EARAFYAPYR DRLLTPAQRE QLQGSEPGAL AEQALAALYG PMGAPRLTDW RQDPLSLWPQ
WWQQQAQGSG LRLGDDGLLE AEDKHWAALQ FDTPGSAFQL DGERHLDGLL ERAGQAAKAA
APDLEILHAG VPLHAEAAAV QANQEINTIG WGSLAAVLLL VWLAFRSLRP ILLVAASLLI
GCGVALAVTV LVFGKVHVLT LVFGASLVGV AEDYGIHWFA SRQAEPADRR WKLLRHLLPG
LWLALLTSAL AYLALGLAPF PGLRQMALFS VVGLAAAFLT VIFWFPWLDG GEIRQTRFSQ
WLGNTLERFP RLHGRRAVTM FVVITLALSA IGIARLQSND DLRSLQSSPP ALMAQQIRLS
QLLGMPSPAQ FYLVQGADAA QLLQREEALT ERLRVLANDK RIGGYRAISD WLPSPSRQQA
DAALTARVEP SVLSAVSEAV GEPLQRPQFA AAPLSAEAFL ASPASQPFRH LWVGEVGGQM
ISVVMVDDLS RADALATLQG AAEGLPGVRW VDRTADFSTL LGHYRKLMGG LLLVGIALVF
GALWLRYRGQ AWRVFAPTLI AGALTLGLLG LFGQPLQLFN VLALMLLLGM GIDYGIFLIE
HRGDASAWLA VCVGAASTWL SFGLLGLSQT PALRAFGLTL LFGIGLVWLI SPLFRPPPHD
LPPA