Gene Smal_3904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3904 
Symbol 
ID6474788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4396931 
End bp4398718 
Gene Length1788 bp 
Protein Length595 aa 
Translation table11 
GC content67% 
IMG OID642733107 
Productpotassium efflux system protein 
Protein accessionYP_002030286 
Protein GI194367676 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0475] Kef-type K+ transport systems, membrane components 
TIGRFAM ID[TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.738179 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATAGCG GCGGTCTGGA ACTGGCCCTG GTGCTGCTGC TGGCGGCGGT CATCGCCGTG 
CCGGTGTTCA AGAAATTCGG CTTCGGCGCG GTGCTGGGCT ACCTGGCGGC CGGCGTGGTA
CTGGGCCCGG ACGGGTTGGG CTTCGTGCAG GACGCCGATC GCATCCTCGG CGCCGCCGAG
ATCGGCGTGG TGATGCTGCT GTTCGTGATC GGGCTGGAGC TGTCGCCCGC GCGCCTGAAG
GTAATGCGAC GCTCGGTATT CGGTGCCGGT GCGGCGCAGG TGGCGCTGTC CGGGCTGGTG
CTGGGCGGCC TGCTGCTGCT CGACCACTTC CAATGGAAAA GTGCGCTGGT GGTGGGCGTG
GCGCTGGCGC TGTCATCCAC TGCGGTGGGC CTGCAGCTGC TGTCAGAACA CAAGGCGATC
AACAGCGACC ATGGCCGGCT CGGGTTCGCC ATCCTGCTGT TCCAGGACCT GATCGCGATT
CCACTGCTGG CGGCCATCCC GCTGCTGGGC GGGGTGAAGA ACGAGACGCT GCGCTGGGAA
GATGCGGCCG TGGCGCTGGG TGCGCTGGCG GTGGTGATCC TGTGCGGGCG GCCGGTACTG
CGCAGGGTGT TCAGCATCAT CGCGCGCACC CGCAGCCCGG AAGTTTTCAC TGCCACTGCC
CTGCTGGTGG TGCTCGGCAC CGCTTGGTTC ATGCAGGAAG CCGGCCTCAG CCCCAGCCTG
GGCGCGTTCC TGGCCGGCGT ACTGCTGTCC GACTCGGAGT TCCGGCACGA ACTGGAAGCG
CAGATCGAGC CGTTCAAGGG GCTGCTGCTG GGCCTGTTCT TCATTGCGGT GGGCATGGGC
ATCGACCTCG ACCGCATCGT TGCCGAGCCG TGGCTCATCG CCGCCGGCGT GGCGATCCTG
CTGGTGGTCA AATTCAGCCT GCTGTACGTG ATCGGGCGCA TCGCAAAGCT CAGTTCACGG
CACTCGCTGC TACTGGGCAG CGTGCTGTGG CTGGGCGGCG AGTTCGCCTT CGTGGTGTTC
AACGAAGCGC AGCGCGCGCA CCTGCTGGGC AGCGCCAACC ATGACCGTCT GGTGGCGATC
GTCGGCCTGT CGATGGCGAT CACGCCACTG CTGATGATCG CGCTGCTCAA GCTGCTCGGC
CAGGAGAAGG CAACGCCGCG CGAGGCAGCC GAGGCCGACA AGGTGGCGCC GGACAACCGG
CCGAAAGTGC TGATTGCCGG CATGGGCCGC TTCGGCCAGG TCATCGCGCG CCTGTTGACC
GCGCAGAAGG TGCCGTTCGT GGCACTGGAA GCGAACCCCG ATACCGTGGC CGACCTGCGC
CGCTTCGGCA ACCAGCTGTA TTACGGCGAC CCGACCCGGC CGGAGATGCT GCGCGCTGCG
GGCGGCGAAC ACATCGATGT GTTCGTGATC ACCGTGGACG ACCCGGAGAC CAACCTGCGT
GCAGTGCGCA TGGTGCGCCG GCTGTACCCG GACGCGAAGG TGCTGGCGCG TGCACGCAAC
CGCCAGCATG CGTGGCGCCT GATGGACATG TCGGCCGAAC CGTTCCGCGA AGTGTTCGGC
ACCAGCCTGG AAATGAGCGG GCGCGTGCTG ACCGCATTGG GTGTTGCACC TGAAGTGGCC
GAACGCCACG TGCAGCGCTT CCGTGAGCAC GACGAGCAGC TGCTGCGCGA CCAGTATCTG
GTGTACGACG ACGAGGCCGC GGTGATCCAG ACCTCGCGCG ATGCACGCAA CGACCTGATG
CACCTGTTTG AAGCCGACGC GGAAAGTGAC GGCGACAAGG AGCGGTGA
 
Protein sequence
MHSGGLELAL VLLLAAVIAV PVFKKFGFGA VLGYLAAGVV LGPDGLGFVQ DADRILGAAE 
IGVVMLLFVI GLELSPARLK VMRRSVFGAG AAQVALSGLV LGGLLLLDHF QWKSALVVGV
ALALSSTAVG LQLLSEHKAI NSDHGRLGFA ILLFQDLIAI PLLAAIPLLG GVKNETLRWE
DAAVALGALA VVILCGRPVL RRVFSIIART RSPEVFTATA LLVVLGTAWF MQEAGLSPSL
GAFLAGVLLS DSEFRHELEA QIEPFKGLLL GLFFIAVGMG IDLDRIVAEP WLIAAGVAIL
LVVKFSLLYV IGRIAKLSSR HSLLLGSVLW LGGEFAFVVF NEAQRAHLLG SANHDRLVAI
VGLSMAITPL LMIALLKLLG QEKATPREAA EADKVAPDNR PKVLIAGMGR FGQVIARLLT
AQKVPFVALE ANPDTVADLR RFGNQLYYGD PTRPEMLRAA GGEHIDVFVI TVDDPETNLR
AVRMVRRLYP DAKVLARARN RQHAWRLMDM SAEPFREVFG TSLEMSGRVL TALGVAPEVA
ERHVQRFREH DEQLLRDQYL VYDDEAAVIQ TSRDARNDLM HLFEADAESD GDKER