Gene Smal_3900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3900 
Symbol 
ID6474784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4391126 
End bp4391833 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content65% 
IMG OID642733103 
Productalpha/beta hydrolase fold 
Protein accessionYP_002030282 
Protein GI194367672 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.479584 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACC GTATTCCCCT GTTGCTACTG CCCGGCCTGC TCAACGATGC CGAGCTGTGG 
CGCTCACAGT TGGCTGATCT TGCCGACATC GCCGATTGCA CGGTGGGCGA CCAGACCCGC
GGTGAAACCC TGCAGGCCGT GGCCCAGGAT GTACTGGCTC AGGCGCCGGA GCGCTTTGCG
CTGGCAGGTT TCTCGCTCGG CGGCTTCGTC GCTCAGCAGA TCCTGCGCAT CGCGCCCGAG
CGCGTGCTAC AGCTGGCGTT GATCGATACC TCGATCCATG CCGATTCGCC GGAACGTGCC
GAGCAGCGCC GTAGCCAACG TGCCAGCGTG CGCCTGCCGG GAAAATTCCA CGGCTTCGGT
GACGCGCTGA TGCGAAGCTA CATCGATGCC TCGCGGCTGG ATGACTACGT GCTGGTGCAG
CGTGTGCGCG ACATGACCGC TCGCCTGGGG GCGGAAGTGT TCCTGCGCCA GAGCGCGCTG
GAACGCCGTG ATGGCCATGA TGTGCTGGCT GGCTACCGCG ATCCATTGCT GATCGTGTGC
GGTGCGAACG ACCGAATCAC GCCGCTGGCG GTGAGCGAGG AGGTGCACGC CCTGGTGCCG
CATTCGCAGC TGGTGGTGGT GCCCGATTGC GGGCACCTGG CACCGATGGA AAAGCCGGAC
GAGGTCAGTG CGGCGATGCG TGGATGGTTG CTGCAAGGCG AGGGATAG
 
Protein sequence
MTDRIPLLLL PGLLNDAELW RSQLADLADI ADCTVGDQTR GETLQAVAQD VLAQAPERFA 
LAGFSLGGFV AQQILRIAPE RVLQLALIDT SIHADSPERA EQRRSQRASV RLPGKFHGFG
DALMRSYIDA SRLDDYVLVQ RVRDMTARLG AEVFLRQSAL ERRDGHDVLA GYRDPLLIVC
GANDRITPLA VSEEVHALVP HSQLVVVPDC GHLAPMEKPD EVSAAMRGWL LQGEG