Gene Smal_3894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3894 
Symbol 
ID6474778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4384037 
End bp4384942 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content68% 
IMG OID642733097 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_002030276 
Protein GI194367666 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0492] Thioredoxin reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.103463 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.856849 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCTG ATGTGCTCAT CGTCGGCGGC AGCTATGCCG GCATTGCCGC CGGCCTGATC 
CTGGCCCGTG CCCGTCGCCC GGTCACCGTC ATCGACGCCG GTTCACCGCG CAATCGTTTC
GCCAGTCATT CGCACGGGGT GCTGGGGCTG GATGGCATCA GCGGCGCCGA GCTGCTGAAA
ACCGCGCGCC AACAGCTGCT CGACTATCCC ACGGTGCGCT GGGTGCATGC CGAAGTGGAG
CACGCCCGCA CCACCGCCGA AGGCGTGGAA GTGCGTACCG CCGATGGCCA GGTGCTGGCC
GCGCGCAAGC TGCTGCTGGC AAGCGGCATC GCCGACCAGC TGCCGGAACT GCCCGGACTG
GCCGAGCGCT GGGGCAGCAC TGTGCTGCAC TGCCCCTACT GCCACGGCTA CGAAGTTGGT
GGTGGTGCCA TCGGCCTGCT CGGCGGCCAT CCGATGTCCG CCAGCAAGGC GCCGCTGTTC
GCCGACTGGG GCAACGTCAC GTTCTTCAGC ATGGGTCTGG AGATCACCGA TGAGGAACAC
GCCGCCATGC AGCAGCGCGG TGTGCGGATC GAGACCTCGC CGGTGCTGGG CGTACACGGC
GACCAGCCGA CCTGGCTGGA AGTGGAGCTG GCTGACGGCC GCCGTATCGC ACAGCGAGCG
TTGTTCGTGC CGGCTACCCA GGCGATGGCC ACGCCGCTGG TGCAGCAGCT GGGCTGCACA
TTGGTCGAGA GCCCGCTGGG CGTGTTGATC GAGGTCGACA TGATGAAGCA GACCTCGGTG
CCGAACGTAT ACGCCGCAGG CGATGCAACC ACCGTCGGCA ACATCACGTT GGCCGCTGCC
GAGGGCGTGC GCGCGGGGAT CGGCGTGCAT CATGCGCTGG TGGCCGAGGA CAGCGTGCCG
CGCTGA
 
Protein sequence
MNPDVLIVGG SYAGIAAGLI LARARRPVTV IDAGSPRNRF ASHSHGVLGL DGISGAELLK 
TARQQLLDYP TVRWVHAEVE HARTTAEGVE VRTADGQVLA ARKLLLASGI ADQLPELPGL
AERWGSTVLH CPYCHGYEVG GGAIGLLGGH PMSASKAPLF ADWGNVTFFS MGLEITDEEH
AAMQQRGVRI ETSPVLGVHG DQPTWLEVEL ADGRRIAQRA LFVPATQAMA TPLVQQLGCT
LVESPLGVLI EVDMMKQTSV PNVYAAGDAT TVGNITLAAA EGVRAGIGVH HALVAEDSVP
R