Gene Smal_3892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3892 
Symbol 
ID6474776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4381484 
End bp4382608 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content67% 
IMG OID642733095 
Productband 7 protein 
Protein accessionYP_002030274 
Protein GI194367664 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTGGA CCATCAAGGT CGTGATCGGC GACGGCGAGC GCGGCCTGGT GTATCGCAAC 
CGTCGTTTCC AGCAGATCCT GCTGCCGGGC GTGCACCGCC TGTCGCCGTT CGGCGGCCGC
CCGCACGTGG ACATCCACAC TGCATCGAAG GGCGCGGCCT ACACCGGCAA CGACCAGGAC
AGCCTGATCG AGGCGCTGGG CGCACGACTG GACACGCACT TCGTGCTGGC CAACGTCGGC
GCCAGCGAGG TCGGCCTGTT GCTGCGCAAC GGCCGCATCG ATGAAGTCCT GCCGCCGGGC
AGCCGCCGTC TGTACTGGCG GGGTTCGGTC GACACCCAGG TGCGCGTGAT GGCGCTGGGT
GACGAGCCGC GCATTGCGGC GGACGTGCAG CAACGCCTGG GCCAGCTGGG CGTGCTGCCG
CGTGTGGCGG TGATCAGCAC CGTGCCGAGC AAGTCGGTCG GCCTGCTGTT CATCGATGGC
ACGCTGCGGC AGACGCTGGA CGCCGGCCTG CACGCGTTCT GGAACTTCAA CGGCAACGTG
TCGGTGGAGC GTGTGGAGCT GCGTGCGCGT TCGCTGGACG TGTCCGGCCA GGAACTGCTC
AGCCGCGACA AGGTGACCCT GCGGGTGAAC CTGGCCGCGA CTGTGCAGGT GGTCGACCCG
GTGCGTGCAC ACCGCACGCT CAGCAATGCC GACGAGTTCG TCTACCGGCA GCTGCAGTTC
GGCCTGCGCC AGGCGATTGC CGCGCGCAGC CTGGACGAGC TGCTGGGCGA CAAGGCCGCA
CTGGACGGCG AGATCGCCGC GCATGTGCAG GCCGCGATCG AGGGCCACGG CGTGCGCTTG
CTCGGCGTGG GCATCAAGGA CGTGATCCTG CCGGGTGAGA TGAAGGAGAT CCTCAACGGT
GTGGTGCTGG CCGAGAAGCA GGCCCAGGCC AGCGTGATCC GCCGTCGTGA GGAGGCCAAC
GCCACGCGTT CGCAGCTCAA CACCGCAAAG CTGATCGAGG ACAACCCGGT GCTGATGCGC
TTGAAGGAGC TGGAGGCACT GGAGAAGGTC ACCGAGAAGA TCGACAAGCT CACCGTGTTC
GGCGGCCTGG ATGGCGTGCT GAAGCAGTTG GTGACGATCA GGTAG
 
Protein sequence
MFWTIKVVIG DGERGLVYRN RRFQQILLPG VHRLSPFGGR PHVDIHTASK GAAYTGNDQD 
SLIEALGARL DTHFVLANVG ASEVGLLLRN GRIDEVLPPG SRRLYWRGSV DTQVRVMALG
DEPRIAADVQ QRLGQLGVLP RVAVISTVPS KSVGLLFIDG TLRQTLDAGL HAFWNFNGNV
SVERVELRAR SLDVSGQELL SRDKVTLRVN LAATVQVVDP VRAHRTLSNA DEFVYRQLQF
GLRQAIAARS LDELLGDKAA LDGEIAAHVQ AAIEGHGVRL LGVGIKDVIL PGEMKEILNG
VVLAEKQAQA SVIRRREEAN ATRSQLNTAK LIEDNPVLMR LKELEALEKV TEKIDKLTVF
GGLDGVLKQL VTIR