Gene Smal_3880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3880 
Symbol 
ID6474763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4368268 
End bp4369236 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content66% 
IMG OID642733082 
ProductABC transporter related 
Protein accessionYP_002030262 
Protein GI194367652 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.555039 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.729872 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGCGA AGGCTTCGAG CTTGGCTTCC CTGAACGATA CGGCGCCCGC CCTGCGCGTG 
CGCGACCTGC GCAAGACCTA TGACAACGGC ACCCAGGCCC TGAAGGGGGT TTCCCTGGAA
GTGGCCCCGG GCGACTTCTT CGCCCTGCTC GGCCCCAACG GTGCCGGCAA GTCCACCCTG
ATCGGCATCA TCAGCTCCCT GGTCAACCTC AGCGAGGGCC AGGTGGAAGT GTTCGGCAGC
GACCTGGTGC GCAACCGCAG CGCCACCATG CGCCTGATCG GGCTGGTGCC GCAGGAAATC
AACTTCAACC TGTTCGAAAA GCCCTTCGAC ATCCTGGTGA ACTACGCCGG TTTCTATGGC
GTGCCGCGCG AGGAAGCCGA GCAGCGTGCC GAAGAGGAAC TCAAGCGCGC CCACCTGTGG
GAAAAGGCGC AGGTGATGAG CCGCACGCTG TCCGGCGGCA TGAAGCGCCG GCTGATGATC
GCCCGCGCGA TGATGACCCG CCCGCGCCTG CTGATCCTGG ACGAGCCGAC CGCCGGCGTG
GACATCGAGA TCCGCCGCGA CATGTGGCGC GTGCTGAAGG AGATCAATGC CGCCGGCACC
ACGATCATCC TCACCACGCA CTATCTGGAA GAAGCCGAGT ACCTGTGCCG CCACCTGGCG
ATCATCAACC ACGGCCAGAT CGTCGAGCAG GGGCCGATGC GCACCCTGCT GGCCAAGCTG
GACGTGGAAG GCTTCCTGCT GGACATCGAC GGTGACCTGC CGGCGCAGCT GCCGGTGATC
GAGGGAGCGA CGCTGACCGC GCCGGACCCG CACACGCTGG ACATCGACAT GCCGCGCGCG
ATGGACCTCA ACCGCGTGTT CGCCACGCTC AACGAGGCCG GTATCCGCGT GCGTTCGATG
CGTACCAAGA GCAACCGCCT GGAGGAGCTG TTCGTGCGCC TCACCGGCAA CCTGGAGAAA
CCCGCATGA
 
Protein sequence
MGAKASSLAS LNDTAPALRV RDLRKTYDNG TQALKGVSLE VAPGDFFALL GPNGAGKSTL 
IGIISSLVNL SEGQVEVFGS DLVRNRSATM RLIGLVPQEI NFNLFEKPFD ILVNYAGFYG
VPREEAEQRA EEELKRAHLW EKAQVMSRTL SGGMKRRLMI ARAMMTRPRL LILDEPTAGV
DIEIRRDMWR VLKEINAAGT TIILTTHYLE EAEYLCRHLA IINHGQIVEQ GPMRTLLAKL
DVEGFLLDID GDLPAQLPVI EGATLTAPDP HTLDIDMPRA MDLNRVFATL NEAGIRVRSM
RTKSNRLEEL FVRLTGNLEK PA