| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_3833 |
|---|
| Symbol | |
|---|
| ID | 6474716 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | - |
|---|
| Start bp | 4315645 |
|---|
| End bp | 4316607 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 642733035 |
|---|
| Product | Pyridoxal-5'-phosphate-dependent protein beta subunit |
|---|
| Protein accession | YP_002030215 |
|---|
| Protein GI | 194367605 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1171] Threonine dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGATT CACTGTTGCC CCGCGCCGAC GACGTCCTGC TTGCTGCCGC GAGGATCGCC
CCGCATGCCA GCGTGACCCC GGTGCTGCGC TCGCACACGC TCGATGCGCT GGCCGGGGCA
CAGCTGGCCT TCAAGGCCGA GCACCTTCAG CGTGGTGGCG CGTTCAAGTT CCGCGGTGCC
TGCAATGCGG TGTGGTCGCT GGATGCCGGC CGCGCCGGTG CCGGCGTGGT GACCCATTCC
TCCGGCAACC ATGGCGCCGC GCTGGCGCTG GCCGCGCGCA CCCGGGGCAT TCCCTGCCAT
GTGGTGGTGC CGGAAGGCGC GGTGGCGGCC AAGCTGGCCA ATATTGCCCG GCATGGCGCC
ACGCTCTGGC ACTGCCCGGC GACCATCGCC GACCGTGAAG CCACCTGCGC CAAGGTGCAG
GCCGATACCG GCGCGACCCT GGTCCACCCC TATACCGATC CGGCGGTGAT GGCCGGGCAG
GGCACTGCTG CCCTGGAACT GCTGCACAGC GACGGCCCGT TCGACGTGCT GGTGGTGCCG
GTGGGCGGCG GCGGCCTCGC CAGCGGCACT GCGCTGGCCC TGCAGCACGC CAGCCCGCAG
ACCCGGCTGG TGCTGGCCGA ACCGGCCGGC GCCGATGACA CCGCGCGCTC GCTGGCTGCA
GGCGAGCGTC TGGGCGCGTT CACCCCGGAC ACGATCTGCG ATGGACTGCG CACCCTGATC
GGCGCACCCA ACTTCGCGCT GCTGCGCGCG GCCGGCGCCG AGGTGATCGT GGTCGACGAC
GTGGCGACAA TGGCCGCGAT GCGCCTGTTG TGGGAGGTCC TCAAGCAGGT GGTCGAACCG
TCCTCGGCCA CCGTGCTGGC CGCAGTGCTG GCGCAACCTG AGCGCTTTGC AGGGCTGCGC
GTCGGGCTGG TGCTGTCCGG CGGCAACGTC GACCTGCCAG CGCTGCGCTG GGGGGCGCCG
TGA
|
|---|
| Protein sequence | MSDSLLPRAD DVLLAAARIA PHASVTPVLR SHTLDALAGA QLAFKAEHLQ RGGAFKFRGA
CNAVWSLDAG RAGAGVVTHS SGNHGAALAL AARTRGIPCH VVVPEGAVAA KLANIARHGA
TLWHCPATIA DREATCAKVQ ADTGATLVHP YTDPAVMAGQ GTAALELLHS DGPFDVLVVP
VGGGGLASGT ALALQHASPQ TRLVLAEPAG ADDTARSLAA GERLGAFTPD TICDGLRTLI
GAPNFALLRA AGAEVIVVDD VATMAAMRLL WEVLKQVVEP SSATVLAAVL AQPERFAGLR
VGLVLSGGNV DLPALRWGAP
|
|---|
| |