Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_3823 |
Symbol | |
ID | 6474706 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 4305322 |
End bp | 4306017 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642733025 |
Product | competence protein F |
Protein accession | YP_002030205 |
Protein GI | 194367595 |
COG category | [R] General function prediction only |
COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
TIGRFAM ID | [TIGR00201] comF family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.523279 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTCTTG CCTACCTCCC TCTACCGGCG GATTGGCCCG CAGCGCTGCT TCGCGTGCTC CTGCCACTGC GGTGTCTGGT CTGCGGCGAC CCGGGCCACG ATGATCTTGA CCTGTGCCGC ACCTGCCTTG CCGACCTGCC GTGGGCCGGC CGCGCCTGCC TGCGCTGCGC ATTGCCGTTG CCGGACAACG CCCTGATCGT CTGCGGCAGC TGCCGCGAGG AAGCGCCACC GCAGGCCGCT ACCCATGCCA GCTTGTTGTA CCTGCCGCCG GTCGACCAGC TGCTGGTGCG GTACAAGTTC CATCAGGACC TCGCCGCCGG TCGCCTGCTC GCACAGTTGA TGCAACGCGC ACCGCCGCCC TGGTGGTGCC CGCCGCTGGT GCCGGTGCCG CTGCATAGGC GGCGCCTGCG CCAGCGCGGC TACAACCAGG CCGCCGAACT GTGCCGCCTG CTGCCGATGC CGGTCTGGCA GGGGCTGTAC CGGCGGCGGC ATACCGCGCC GCAGTCCGAG CGTACGGCCG AACAGCGCAG GGAAAACCTG TTCGATGCGT TCGATGTACG TGGTCCGGTG CCGCCGCGAC TGACCGTGGT GGACGATGTG ATGACCACCG GCAGCACGGT GATGGAGGTT GCGGAGACGC TGCGGTGGGT GGGAGTGGAC GAGGTGCGCG TATGGGTCTG CGCGCGGGCG CCGTGA
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Protein sequence | MPLAYLPLPA DWPAALLRVL LPLRCLVCGD PGHDDLDLCR TCLADLPWAG RACLRCALPL PDNALIVCGS CREEAPPQAA THASLLYLPP VDQLLVRYKF HQDLAAGRLL AQLMQRAPPP WWCPPLVPVP LHRRRLRQRG YNQAAELCRL LPMPVWQGLY RRRHTAPQSE RTAEQRRENL FDAFDVRGPV PPRLTVVDDV MTTGSTVMEV AETLRWVGVD EVRVWVCARA P
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