Gene Smal_3823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3823 
Symbol 
ID6474706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4305322 
End bp4306017 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content70% 
IMG OID642733025 
Productcompetence protein F 
Protein accessionYP_002030205 
Protein GI194367595 
COG category[R] General function prediction only 
COG ID[COG1040] Predicted amidophosphoribosyltransferases 
TIGRFAM ID[TIGR00201] comF family protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.523279 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCTTG CCTACCTCCC TCTACCGGCG GATTGGCCCG CAGCGCTGCT TCGCGTGCTC 
CTGCCACTGC GGTGTCTGGT CTGCGGCGAC CCGGGCCACG ATGATCTTGA CCTGTGCCGC
ACCTGCCTTG CCGACCTGCC GTGGGCCGGC CGCGCCTGCC TGCGCTGCGC ATTGCCGTTG
CCGGACAACG CCCTGATCGT CTGCGGCAGC TGCCGCGAGG AAGCGCCACC GCAGGCCGCT
ACCCATGCCA GCTTGTTGTA CCTGCCGCCG GTCGACCAGC TGCTGGTGCG GTACAAGTTC
CATCAGGACC TCGCCGCCGG TCGCCTGCTC GCACAGTTGA TGCAACGCGC ACCGCCGCCC
TGGTGGTGCC CGCCGCTGGT GCCGGTGCCG CTGCATAGGC GGCGCCTGCG CCAGCGCGGC
TACAACCAGG CCGCCGAACT GTGCCGCCTG CTGCCGATGC CGGTCTGGCA GGGGCTGTAC
CGGCGGCGGC ATACCGCGCC GCAGTCCGAG CGTACGGCCG AACAGCGCAG GGAAAACCTG
TTCGATGCGT TCGATGTACG TGGTCCGGTG CCGCCGCGAC TGACCGTGGT GGACGATGTG
ATGACCACCG GCAGCACGGT GATGGAGGTT GCGGAGACGC TGCGGTGGGT GGGAGTGGAC
GAGGTGCGCG TATGGGTCTG CGCGCGGGCG CCGTGA
 
Protein sequence
MPLAYLPLPA DWPAALLRVL LPLRCLVCGD PGHDDLDLCR TCLADLPWAG RACLRCALPL 
PDNALIVCGS CREEAPPQAA THASLLYLPP VDQLLVRYKF HQDLAAGRLL AQLMQRAPPP
WWCPPLVPVP LHRRRLRQRG YNQAAELCRL LPMPVWQGLY RRRHTAPQSE RTAEQRRENL
FDAFDVRGPV PPRLTVVDDV MTTGSTVMEV AETLRWVGVD EVRVWVCARA P