Gene Smal_3815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3815 
Symbol 
ID6474698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4296777 
End bp4297931 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content69% 
IMG OID642733017 
Productsugar isomerase (SIS) 
Protein accessionYP_002030197 
Protein GI194367587 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2222] Predicted phosphosugar isomerases 
TIGRFAM ID[TIGR02815] putative sugar isomerase, AgaS family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.994709 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.536429 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGTCA CCCTGCTTTC CGATGTGTCC GCCTGGCAGC GCCTTGGCGG AGCCGATACC 
GCTACCGAAA TCGCGCAGCA GCCTGCGCTG TGGGAGGCCC TCGCACAGGA CCTGTCGCGT
GCCCGCGACC GCCTGCAGGC CTTCCTCGGC GACAGCCTCA ATGATCCCAA CCAGCGCGTG
CTGTTCACCG GCGCCGGCAG CTCCGGCTTC ATTGCCGAAA TGGTGGCCGA TGCAATCAAC
GCGCAATGGC CGGCCGATGT GCGCGTGGTG CATACCACCA GCCTGCTGAC CCACCCGGCG
CTGTACCTGC AGCGCGAGCG CCCGACCCTG CTGGTCTCGT TCGGCCGCAG CGGCTCCAGC
CCGGAAAGCG TGGCGGCGGT GGACCGCGTG CGCAGCGACG TGGATGACGC GCGCTTCCTC
GACATCACCT GCAATGCCGA TGGCGAACTG GCCCGTCGTG GCGCCGGCCG TGCCGATACC
TGCACCCTGC TGATGCCGTC GGCCAGCTGC GACCGTGCCT TCGCCATGAC CAGCAGCCTG
ACCTGCATGC TGCTGGCCGC ACTGACCGTG TTCGATCATT CGCCGTGGGA TGCGCGCGTG
GCGCGCCTGA AGCACATTGC AGCGCTGGCC CGCGAAGGCC AGGCACAGTG GGATGCACCG
GTGGCGGCGC TGGCGCAGCG CCCGTTCAAC CGCATCATCT ATCTCGGCAG CGGCCCGCTG
GAAGCGCTGG CACGCGAGTG CGCACTGAAG GTGCTGGAGC TGACCGCCGG CCGCGTGCTG
GCGCTGGCCA ACACGCCGCT GGGCTTCCGC CACGGCCCGA AGTCGACGCT GGACGGCAAC
ACCCTGGTGG TGGTGGTGCG CAGCGTGCAG CCGCTGGCGC GCCGCTTCGA ACAGGACCTG
CTGGAAGAAC TGCGCCGCGA TGGCGTGGCC GGGCAGGTAC TGGCGATCGG CCCGCATTCG
GATATCGGCG CCGATGACGA GTACACCCTT ACCGTACCGG CACTGGATGA TCCGTGGCTG
GCGCCGGTGT GGCTGGGCTT CGCGCAGCTG TTCGCGCTGC AGCGCTCGGC TGCGCTCGGC
CTGACCCCCG ACAACCCGTT CCCGGACGGC ACCGTCAACC GCGTCGTCAA GGGCGTCACC
ATCCACCATG GCTGA
 
Protein sequence
MDVTLLSDVS AWQRLGGADT ATEIAQQPAL WEALAQDLSR ARDRLQAFLG DSLNDPNQRV 
LFTGAGSSGF IAEMVADAIN AQWPADVRVV HTTSLLTHPA LYLQRERPTL LVSFGRSGSS
PESVAAVDRV RSDVDDARFL DITCNADGEL ARRGAGRADT CTLLMPSASC DRAFAMTSSL
TCMLLAALTV FDHSPWDARV ARLKHIAALA REGQAQWDAP VAALAQRPFN RIIYLGSGPL
EALARECALK VLELTAGRVL ALANTPLGFR HGPKSTLDGN TLVVVVRSVQ PLARRFEQDL
LEELRRDGVA GQVLAIGPHS DIGADDEYTL TVPALDDPWL APVWLGFAQL FALQRSAALG
LTPDNPFPDG TVNRVVKGVT IHHG