Gene Smal_3800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3800 
Symbol 
ID6474682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4273512 
End bp4274813 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content67% 
IMG OID642733001 
Productaminotransferase class V 
Protein accessionYP_002030182 
Protein GI194367572 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0520] Selenocysteine lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCGCA GCCGTCGCTC CCTGCTGCGC GCAGGTGCGC TGTTGCCGGC CAGTGCAGCG 
CTTGCCGCGC TGGCTGCTCC GGCAGCCGCG CGCTACGCTG TGCCGATGGA CATTCCTGCA
CCTTCCACGA CGCCGGATGT GTTGGCCCGT GACGAGTCGT ACTGGTCCGC CGTCGCCAGC
CACTTCGACA TCACCGATGA AGTGAACCTC CTGGAGAACG GCTACTGGGG CGCGATGGGC
AAGCAGACCC TGGCCAGCTA CCAGCGGCAT ACCGCCGAGG TGAACCGGGG CAATGCCTGG
TACGGTCGCC ACGCGTTCCC GGCGCAGTAC CTGGCCGTGC ATCGGCAGGT GGCCGACATG
CTTGGCGTCG GCGCCGACGA AATCGCGCTG ACCCGTGGCG CCACCGAAGC GATGCTGGCG
CTGATCGGTG GCTACAACCG GTTGGCCGCG GGCGACCAGG TGCTGTACGC CGACATCGAC
TACGACAGCA TGATCAACGC GATGCGCTGG TTGCAGCAGC GTCGTGGCGT GCAGGTCGAG
CGCATCGCAC TGCCTGTGGT GCCCACCCAT GAGCAGATCC TGCAGGCTTA CGATGAGGCG
TTCGCGCGCC TGCCGCGCCT GAAACTGGTG CTGCTGACCC AGGTCAGCCA CCGCCATGGG
CTGGTGCTGC CGGTGGCCGA GCTCACCGAG CGTGCGCGGG CACGCGGCAT CGATGTGATT
GTCGATGCCG CACATGGCTT TGGCCAGATC GACTACGCGG TGCCGGACCT GAAGGCCGAT
TTCGTTGGCA TCAACCTGCA CAAGTGGATC GGCGCACCGG TGGGCGTGGG CGCGATGTAC
GTGCGCAAAG GACGCGTGGC CGACCTGGAT CCGTACATGG GTGAGACCGA CGACGGCCGC
CTGGGCAGTC GCGTGCACAC CGGCACGGTC AACTTCGCCG CCTATCTGGC GCTGCCCGAG
GCCATCGCGC TGCATCAGCG TATCGGCGCA GCGAACAAGC AGGCGCGGCT GCGCTACCTG
CGTGAGCGTT GGACGGTGGC GGCGCGGCAG ATGGCGCATA TCGAGGTGCT GTCGTCGCCG
GATCCGGCGT TGGCCAGTGC ACTGGCCAGC TTCCGCCTGC GTGGCCATGC CTCGGTGGAA
GACAACCAGG CGCTGCAGAA ACGGCTGCTG GATGAACATC GGATATTCAC CACCCATCGC
GATGGCCTGG ACTCCGGCGC CTGCGTGCGG GTGACACCAT CGGTGTTCAC CCGCCCCGGG
CAGATGGATG CGCTGGTGCA GGCGTTGGCC GCGCTGGCCT GA
 
Protein sequence
MDRSRRSLLR AGALLPASAA LAALAAPAAA RYAVPMDIPA PSTTPDVLAR DESYWSAVAS 
HFDITDEVNL LENGYWGAMG KQTLASYQRH TAEVNRGNAW YGRHAFPAQY LAVHRQVADM
LGVGADEIAL TRGATEAMLA LIGGYNRLAA GDQVLYADID YDSMINAMRW LQQRRGVQVE
RIALPVVPTH EQILQAYDEA FARLPRLKLV LLTQVSHRHG LVLPVAELTE RARARGIDVI
VDAAHGFGQI DYAVPDLKAD FVGINLHKWI GAPVGVGAMY VRKGRVADLD PYMGETDDGR
LGSRVHTGTV NFAAYLALPE AIALHQRIGA ANKQARLRYL RERWTVAARQ MAHIEVLSSP
DPALASALAS FRLRGHASVE DNQALQKRLL DEHRIFTTHR DGLDSGACVR VTPSVFTRPG
QMDALVQALA ALA