Gene Smal_3793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3793 
Symbol 
ID6474675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4265859 
End bp4266494 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content65% 
IMG OID642732994 
Productcytochrome o ubiquinol oxidase, subunit III 
Protein accessionYP_002030175 
Protein GI194367565 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID[TIGR02842] cytochrome o ubiquinol oxidase, subunit III 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.425485 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTGT TGACCCGCCC CGAGCTGGCC AGCGACACGC AGGCGCACGA GGACCACCAC 
GAACACGACC ATGGCCACGA ACAGGGCGGC ATGAAGGTGT TCGGCATGTG GGTCTACCTC
ATGTCCGACC TGGTGCTGTT CGGTTCGCTG TTCGCCTCGT ATGCAGTGCT CAGCACCGCC
TACGCCGGCG GCCCCACCGG CAAGGACCTG TTCTCGCTGC CGTTCGTGAT GGCCGAGACC
TTCCTGCTGC TGGTTTCCAG CATCACCTAC GGCCAGGCCG TGCTGGCGAT GCATCGCCAC
GACACCTCGG CGGTGCTGCG CTGGCTGGGC GTGACCTTCG TGCTCGGTGC CTCGTTCATC
GGCATGGAGA TCTACGAGTT CTCGCACCTG ATCCACGAAG GCGCGGGCCC CAGCACCAGT
GCCTACCTGT CGGCGTTCTT CGCGCTGGTC GCCACCCACG GCCTGCACGT GGCCAGCGGC
CTGATCTGGA TGGCGGTGGT CATGCACCAG GTCTACAGCC GCGGCCTGAC CCCGACCAAC
ATCACCCGCG TGTCGTGCCT GAGCCTGTTC TGGCACTTCC TGGACCTGGT GTGGATCTGC
GTCTTCACCT TCGTCTACCT GATCGGAGCC TTCTGA
 
Protein sequence
MNLLTRPELA SDTQAHEDHH EHDHGHEQGG MKVFGMWVYL MSDLVLFGSL FASYAVLSTA 
YAGGPTGKDL FSLPFVMAET FLLLVSSITY GQAVLAMHRH DTSAVLRWLG VTFVLGASFI
GMEIYEFSHL IHEGAGPSTS AYLSAFFALV ATHGLHVASG LIWMAVVMHQ VYSRGLTPTN
ITRVSCLSLF WHFLDLVWIC VFTFVYLIGA F