Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_3786 |
Symbol | |
ID | 6474668 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 4259368 |
End bp | 4260030 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642732987 |
Product | Exopolysaccharide synthesis ExoD |
Protein accession | YP_002030168 |
Protein GI | 194367558 |
COG category | [R] General function prediction only |
COG ID | [COG3932] Uncharacterized ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.232502 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.886093 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTACC GTGCCCCCGA AACCAATGAC AGCGCGCCCC TGGCCGAGCA GATCGAGCAG ATGATCGACG AGCTGCCCGG CGACCAGGTC AGCGTCGGTA CCCTGCTCAG CGCACTGGGC GATGAAGGCC TGCTGCTGAT CGTGATCCTG CTCTCGGCCA TCTTCATCAT TCCGGTGTCG ATTCCCGGGC TGAGTACCGT GTTTGGCGCC TCGATCCTGC TGATCGGCCT GAGCCGGGTG CGCAACCGCC CGCTGTGGGT GCCGCAGAAG CTGGCGCGCC GCGAGATCGC CACCGACAAG CTGAAGGCCA ACCTGGGCCG TGCGCTGAAA TGGGTGCACC GCATGGAGCG GCTGTCACGG CCGATGCGGC TGGCGGTGAT GGTGCGCTCG AAGAAGATGA TGCGCCTGAA CAACCTGATG CTGGTGTTCG CGACCCTGCT GCTGATGGCG CCGGCCGGGC CGATTCCGTT CAGCAATACC TTGCCGGCGC TGGCGCTGAT GTCCTTTGCG ATCGGCTTCA TCCAGCGCGA TGGTGCGGCG GTGGCGGCTG GTTATGGTTT CGTGGTGGCT ACGGTGGTGT ATTTCGGCGT GCTGCTGGGT GGCGTGGGGT TTGCCGCCGA GTCGGTGTTC AGTGGATTCC GCGCTGCGCC TTCGGAAATG TAG
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Protein sequence | MTYRAPETND SAPLAEQIEQ MIDELPGDQV SVGTLLSALG DEGLLLIVIL LSAIFIIPVS IPGLSTVFGA SILLIGLSRV RNRPLWVPQK LARREIATDK LKANLGRALK WVHRMERLSR PMRLAVMVRS KKMMRLNNLM LVFATLLLMA PAGPIPFSNT LPALALMSFA IGFIQRDGAA VAAGYGFVVA TVVYFGVLLG GVGFAAESVF SGFRAAPSEM
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