Gene Smal_3786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3786 
Symbol 
ID6474668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4259368 
End bp4260030 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content65% 
IMG OID642732987 
ProductExopolysaccharide synthesis ExoD 
Protein accessionYP_002030168 
Protein GI194367558 
COG category[R] General function prediction only 
COG ID[COG3932] Uncharacterized ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.232502 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.886093 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTACC GTGCCCCCGA AACCAATGAC AGCGCGCCCC TGGCCGAGCA GATCGAGCAG 
ATGATCGACG AGCTGCCCGG CGACCAGGTC AGCGTCGGTA CCCTGCTCAG CGCACTGGGC
GATGAAGGCC TGCTGCTGAT CGTGATCCTG CTCTCGGCCA TCTTCATCAT TCCGGTGTCG
ATTCCCGGGC TGAGTACCGT GTTTGGCGCC TCGATCCTGC TGATCGGCCT GAGCCGGGTG
CGCAACCGCC CGCTGTGGGT GCCGCAGAAG CTGGCGCGCC GCGAGATCGC CACCGACAAG
CTGAAGGCCA ACCTGGGCCG TGCGCTGAAA TGGGTGCACC GCATGGAGCG GCTGTCACGG
CCGATGCGGC TGGCGGTGAT GGTGCGCTCG AAGAAGATGA TGCGCCTGAA CAACCTGATG
CTGGTGTTCG CGACCCTGCT GCTGATGGCG CCGGCCGGGC CGATTCCGTT CAGCAATACC
TTGCCGGCGC TGGCGCTGAT GTCCTTTGCG ATCGGCTTCA TCCAGCGCGA TGGTGCGGCG
GTGGCGGCTG GTTATGGTTT CGTGGTGGCT ACGGTGGTGT ATTTCGGCGT GCTGCTGGGT
GGCGTGGGGT TTGCCGCCGA GTCGGTGTTC AGTGGATTCC GCGCTGCGCC TTCGGAAATG
TAG
 
Protein sequence
MTYRAPETND SAPLAEQIEQ MIDELPGDQV SVGTLLSALG DEGLLLIVIL LSAIFIIPVS 
IPGLSTVFGA SILLIGLSRV RNRPLWVPQK LARREIATDK LKANLGRALK WVHRMERLSR
PMRLAVMVRS KKMMRLNNLM LVFATLLLMA PAGPIPFSNT LPALALMSFA IGFIQRDGAA
VAAGYGFVVA TVVYFGVLLG GVGFAAESVF SGFRAAPSEM