| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_3781 |
|---|
| Symbol | |
|---|
| ID | 6474663 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 4250609 |
|---|
| End bp | 4253284 |
|---|
| Gene Length | 2676 bp |
|---|
| Protein Length | 891 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642732982 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002030163 |
|---|
| Protein GI | 194367553 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0290827 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.45531 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGACA CACCGGTTTT TCAGGGACAC CATCTGATCG AACAGAATGC GTTCGAGCAA
AGCCAACTGC TGAAGTCGCT TGCCAGGAGT GGTCATTTCA CGCTCCACGG ACCCAACAAC
ATTCTCAACC TGCCCGCGAA CCCCGCGCTG GCAACCCGCC TGGGTATTTC GCCACACTCA
GGCGGCCCGT TGAGTGCCTA CTCGGATCAA CTGAAGTTCG TTCTCGAGGA CCTCACGGAA
ACCTACGATG GCCGAACCCT GCTGGCGAAG GATTCTCCGC CGGATGTGCG CGCTGCCGCC
GTCGAGCGTA TGGGTGCCCG CATCCAGGAC CTGGAATACA CCCTTCGCGC CGGCATCCTC
AACGGCGACC TGGTCACCAA CACGCCCGAG AACATGACCG CGGCGGAAGC CAACGCCAAG
ATCCGCACCT TCTTCTCCGA TCTGGACGGC TACCAGCGCA CCCACGCCGC GCAGATTGCG
GAACTGAAGA CCCTCAACCC CTCCGAGTTG CGCTGGCGCG CTGTCACCCA GTCCGAAGCC
AATGTGAAGG CGGCGCTGGA TGCCATCGAC GAACCCGGCA ACTCGACCCT GAGCGAGCGC
TGGGGTGGCC GCGCATCGAT GGGCACCGCG ATTCAGGAGG CCAACCAGGG CGGTCGCCTG
CCGCTGACCG AGCACACCGC TGCCCGCGTA CGCACTGCGT TCAACCCGGA AATGCCACTG
ACCATCGTGC GCCCTGGCCC GGCAAGCACG GCTCCGGAAC TGGCTGGCTC TGCAGGGCGA
GCGGGCGCTG CAGAAGGTGC CGCCGAAGCT GCCGCCGCGC GCGGACAGAT TACCGGCGCC
CGCGTACTCG GGGCCGCGGG CGTCGCCGCA CTGGCCGTGG ACTTCGCCAT CACCGGCCAC
CGCGTGGCCG AGTTGCGCAG CGAGGGCAAC GACGCCGGCG CAAAATCTGC GGCCACCCAC
TTCGTGGGGC GCACTGCGGG TGGCTTTGGC GGCGGCTTCC TGTTGGGCGC AGGGTACGGA
GTCGTTACCG GCTCGTGGAC CGGACCAGGT GCGCTGGCTA CCGGACTGCT GGGCGGCGTG
GCCGGCGGCT TCGCCGGTGA GTACTGGGCC CAGTACCAGG ACAAGAAAGC CGTTTACACC
CAGGTGGACC GCAGCGGCAA CGAATGGAGC CGCGACCCGG AGGATGCAGA GGGCACCTGG
AGCCGCAGCG TGCGCACACC GCAGCCCGAC GGAAGCTACC GCGAGATCAC GATGGTCGCC
GGTGGCCGGC TGGTGGACGA GCTGAACTAC AAAGCCGCCA ACGACTCCTA TTCACTGGGC
ATGGCCAACC TGCCCAAGCC GCAGAACCCT TTCAAGCTTG ATGCAAGCGG CGAGAGCATG
CCCCCGCGCG AGCCGTTTGA AACCAACCGA CACTACGTGC GCAATCCGCA CAACGGCGAA
TGGAACCTCT CCATCCACTC AATGATTGAT GGACGCGTCC CCTTTGACTA CAGCGTGCCC
GTCGGCCCGG AAAAGTCCGA CCAACTGGAA CGGGAATCGC AGCGCATCAT TGCCCAGAAC
GCCTTGAACA CGCCGGAGGC GCTCGCCGCC CGTTACCAGG TGGCGTTCAA CCAGTACAAC
TGGCACGAGT TCGCCACCAT TGAGCCGGTA CCGGAGGTGA TCACCAACGC GCTGACCCAG
ACGCAGCCCC TGCGCGCCTC CAACGGCGAG AAGTACACGC AGGATGCCAA CGGGCAGTGG
CAAACGCCGG GTTGGGTGTA TGGCACCAAC CCGGCCGAGG GCAGCATCAT TGAGGAGCTC
AATCGTACGC GCCAGAGCCA GCAGGCCGGC GTACAGGAGC TGACGTCCAT GGCCGACATC
GCCCGGGCCA ACCCCACGCC GACCGAGTAC GGCCTGCGCA GCCAGGTGGT GGACGCCTAC
CGTAGTGCCG GCATTGTGCG CAGTGCCGAA GAGATTGATG ACGCCGTAGC CGCCGTTGCC
CAGGATCACG CACGCGCCGT GCCCGACTTC GGCACGTTCA CGCTGCAGGT ACAGAAGGAT
GGCTCGCTGG CCACACTGGC TGGGAAAGAT GACGAGCGCA TGCAGATCGT TTCCGTCACC
ACGCCAGAGG AGATTGCTCA GGCACACGTG CGGCGCACGA CCTCAGAACA AGAGCAGCAA
CCTGCGGGCG TCGCACCGGA TGCACCTTCG CCACACACCT CCAGGCCTGC CACGCAGCAC
GACGCTGACG TAGACCGGCA CCACAGCACA GCCCTGCGCC CAGGTGGCAG CGGGCTGCTG
GAGCAGTTGC GCTCGTCGGT AGCCATGCTG GATGAAAGGA ACAACAAGCC GTGGGACCAG
AGCAGCGACC GCCTGCTGGC CAGCGCCTAC CGGCTTGCGG CAGAAGCCGG GTTCAAGCCC
GGCGACACAG TAGACATGGC ATTGAGTGAA GCCACCGAAA CCCGTGCTGC GGGTACCACG
CTGTTCGTGA CGCGCTCCGG GCTGGGCGCG TCATCAGACC CTGCCGCCAA CCGGGTGCAG
ATGCCAACAC AGGACGCCTT GGCGATCGCA CCGGAGCAGC AATATGCAGC GGCCAACCGG
AGCCTCGGCG CTCAGGACCG GGAGCAGTCG CAGCAGCTGG CGCAAGCGCA GGAGCGGCAG
CAGGAAGAGA GCCGGCAGGG GCCGCGGATG GGCTGA
|
|---|
| Protein sequence | MADTPVFQGH HLIEQNAFEQ SQLLKSLARS GHFTLHGPNN ILNLPANPAL ATRLGISPHS
GGPLSAYSDQ LKFVLEDLTE TYDGRTLLAK DSPPDVRAAA VERMGARIQD LEYTLRAGIL
NGDLVTNTPE NMTAAEANAK IRTFFSDLDG YQRTHAAQIA ELKTLNPSEL RWRAVTQSEA
NVKAALDAID EPGNSTLSER WGGRASMGTA IQEANQGGRL PLTEHTAARV RTAFNPEMPL
TIVRPGPAST APELAGSAGR AGAAEGAAEA AAARGQITGA RVLGAAGVAA LAVDFAITGH
RVAELRSEGN DAGAKSAATH FVGRTAGGFG GGFLLGAGYG VVTGSWTGPG ALATGLLGGV
AGGFAGEYWA QYQDKKAVYT QVDRSGNEWS RDPEDAEGTW SRSVRTPQPD GSYREITMVA
GGRLVDELNY KAANDSYSLG MANLPKPQNP FKLDASGESM PPREPFETNR HYVRNPHNGE
WNLSIHSMID GRVPFDYSVP VGPEKSDQLE RESQRIIAQN ALNTPEALAA RYQVAFNQYN
WHEFATIEPV PEVITNALTQ TQPLRASNGE KYTQDANGQW QTPGWVYGTN PAEGSIIEEL
NRTRQSQQAG VQELTSMADI ARANPTPTEY GLRSQVVDAY RSAGIVRSAE EIDDAVAAVA
QDHARAVPDF GTFTLQVQKD GSLATLAGKD DERMQIVSVT TPEEIAQAHV RRTTSEQEQQ
PAGVAPDAPS PHTSRPATQH DADVDRHHST ALRPGGSGLL EQLRSSVAML DERNNKPWDQ
SSDRLLASAY RLAAEAGFKP GDTVDMALSE ATETRAAGTT LFVTRSGLGA SSDPAANRVQ
MPTQDALAIA PEQQYAAANR SLGAQDREQS QQLAQAQERQ QEESRQGPRM G
|
|---|
| |