Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_3754 |
Symbol | |
ID | 6474636 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 4221540 |
End bp | 4223078 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642732955 |
Product | diguanylate cyclase |
Protein accession | YP_002030136 |
Protein GI | 194367526 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGACC AGCCCGACCA CCGCCCTGCC CCCGGTACCG CCCTTGGGCC GCCGGCACGC GTGCGCGCGG TGGTCGATGA CGGGCTGGGA GACCGCGTGG TGCTGCAGGG CGGCGGTGGC GTGGCCCTGC AGCAGCTGTT CGCCGGGGCC GATGCGCCGG AACCGCTGCT GGCCGCGTTC GCCAATGGCA TGGCCACCCT GCCCGGCGAA CTGGGCGATA TGGGCGACCG CCTGCAGTCG GCGCAGGCCA GCGCCGATTG GCCGCGCTAT GGGCGCGCGA TGCGGCAGCT GATCGACAAG TACATCCGAA CCATCGAACA GCATTCGCCG GATGGCCAAC CCGAAAGCCT GCGCCTGTCC GAGCAGCTGC GGTTGCTGCT GGGTGGCGCG GTGGTGGCCC TGCTGCAGCA CGACCCGGAC CTGCGCGAGC AGGCGCAGAC GCTGGCCATG CAGCTGCGCC AGTGGCAACC GGGCACGGCG CTGGAACCGA TCGAACAGGG CGTGCGCGAG CTCGGCCACC AGGTCGGCGT GCGTGCCGAG AGCTGGCAGG AGCAGCAGGC GCTGCTGCTT GAGCTGTTCG CGCTGCTGCT GGAGAACGTC AGCGAACTGC TGGACGACCG CAGCTGGCTG CAGGGCCAGA TCGCGGCGGT GCGCCATCTA CTGGACGGAC CGCTGGAAGC CGAAGCGGTG GAGCGCACCC GCGCCGAGCT GCGCGAAGTG ATCTACAAGC AGGGCCTGCT GCGCCAGGGC ATCGACGATT CGAAGGCGGC GATGCGCGGG CTGATGGGTG AGTTCATCGA GCGCATGGAT GGCATGGCCA CCAGCACCGG TGAGTACCAC GACCGCATCG GCAGCTATGC ACTGCAGCTG CGCGAGGCAC GCAGCATCGC CGACCTCAAC CAGCTGCTGC AGGAAGTGAT GCGCGATACC GGCAAGGTGC AGCAGCAGGC CGCGCAGGCG CGCGATCATC TGGCCAGCGC GCGCCAGGAA GTGGAACGTG CCGAGCAGCG CATCGCCGAG CTTGAGCAGG AACTGCGCGC GGCCGGCGAT CTGGCCCGCA TCGATCCCCT GACCCAGGCA CTGAACCGCC GCGGCCTGGA CGAACTGCTG CAGCGTGAGC TGGCCCGCGC CGCGCGCAAC AACTCGCCTT TGGGCGTGGC GATGATCGAC CTGGATGATT TCCACCAGAC CAACGATGCG CACGGCCATG CCGGTGGCGA TGCACTGCTG CAGCACCTGG TGGCCGTGTG CAAGCTGCTG CTGCGCGCCA CCGACGGCAT CGCGCGGCTG GGTGGCGACG AGTTCGTGCT GGTACTGCCT GAAACCCAGG GTGCCGACAG CATGGCCACC GTGCAACGCC TGCAGCGCTC GCTGGCGCAC CGCTTGTTGA CCGTGCAGGA CCAGCGCGTG CCGGTGCACT TCAGTGCCGG GCTGGCGCAA TGGCAGCCTG GCGATGACAC CGAAGCGCTG CTGCGGCGCG CCGATGACGC GCTGTATGCG GCCAAGCGGC AGGGCAAGAA CCGGGTGCAG GCAGGGTAG
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Protein sequence | MTDQPDHRPA PGTALGPPAR VRAVVDDGLG DRVVLQGGGG VALQQLFAGA DAPEPLLAAF ANGMATLPGE LGDMGDRLQS AQASADWPRY GRAMRQLIDK YIRTIEQHSP DGQPESLRLS EQLRLLLGGA VVALLQHDPD LREQAQTLAM QLRQWQPGTA LEPIEQGVRE LGHQVGVRAE SWQEQQALLL ELFALLLENV SELLDDRSWL QGQIAAVRHL LDGPLEAEAV ERTRAELREV IYKQGLLRQG IDDSKAAMRG LMGEFIERMD GMATSTGEYH DRIGSYALQL REARSIADLN QLLQEVMRDT GKVQQQAAQA RDHLASARQE VERAEQRIAE LEQELRAAGD LARIDPLTQA LNRRGLDELL QRELARAARN NSPLGVAMID LDDFHQTNDA HGHAGGDALL QHLVAVCKLL LRATDGIARL GGDEFVLVLP ETQGADSMAT VQRLQRSLAH RLLTVQDQRV PVHFSAGLAQ WQPGDDTEAL LRRADDALYA AKRQGKNRVQ AG
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